#include <stdio.h>
#include <stdlib.h>
#include <math.h>
#include "clustalw.h"
Defines | |
#define | MAX(a, b) ((a)>(b)?(a):(b)) |
#define | MIN(a, b) ((a)<(b)?(a):(b)) |
Functions | |
static sint | count_gaps (sint s1, sint s2, sint l) |
void | aln_score (void) |
Variables | |
float | gap_open |
sint | nseqs |
sint * | seqlen_array |
short | blosum45mt [] |
short | def_aa_xref [] |
sint | debug |
sint | max_aa |
char ** | seq_array |
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