SequencePartList Class Reference

This class assists in the restriction site layout. More...

#include <SequenceCanvas.h>

List of all members.

Public Member Functions
	SequencePartList ()
virtual	~SequencePartList ()
	Constructor.
virtual void	prepare (int size)
	Prepares memory for storage (improves speed on huge sequences).
virtual void	add (int id, int from, int to)
	Adds an item.
virtual void	makeLevels ()
	Generates the number of necessary levels to show items non-overlapping.
virtual int	here (int pos, int level)
	The item at that position at that level.
virtual int	getID (int internalID)
	The "outside" ID of the item (different from the internal one).
virtual int	getFrom (int internalID)
	Returns the beginning of the item.
virtual int	getTo (int internalID)
	Returns the end of the item.
virtual int	size ()
	Returns the size in bytes of the structure (debugging only).
virtual int	getLevel (int i)
Public Attributes
int	maxlevels
int	slen
Private Attributes
wxArrayInt	vi
wxArrayInt	vl
wxArrayInt	vx
wxArrayInt	vy
vector< wxArrayInt >	vl2
	Items per position per level.

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Detailed Description

This class assists in the restriction site layout.

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Constructor & Destructor Documentation

SequencePartList::SequencePartList (   )  [inline]

virtual SequencePartList::~SequencePartList (   )  [inline, virtual]

Constructor.

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Member Function Documentation

void SequencePartList::add (  int  id, int  from, int  to )  [virtual]

Adds an item.

int SequencePartList::getFrom (  int  internalID  )  [virtual]

Returns the beginning of the item.

int SequencePartList::getID (  int  internalID  )  [virtual]

The "outside" ID of the item (different from the internal one).

int SequencePartList::getLevel (  int  i  )  [virtual]

int SequencePartList::getTo (  int  internalID  )  [virtual]

Returns the end of the item.

int SequencePartList::here (  int  pos, int  level )  [virtual]

The item at that position at that level.

void SequencePartList::makeLevels (   )  [virtual]

Generates the number of necessary levels to show items non-overlapping.

void SequencePartList::prepare (  int  size  )  [virtual]

Prepares memory for storage (improves speed on huge sequences).

int SequencePartList::size (   )  [virtual]

Returns the size in bytes of the structure (debugging only).

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Member Data Documentation

int SequencePartList::maxlevels

int SequencePartList::slen

wxArrayInt SequencePartList::vi [private]

wxArrayInt SequencePartList::vl [private]

vector<wxArrayInt> SequencePartList::vl2 [private]

Items per position per level.

wxArrayInt SequencePartList::vx [private]

wxArrayInt SequencePartList::vy [private]

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The documentation for this class was generated from the following files:

• C:/Programme/Dev-Cpp/Mine/GENtle/SequenceCanvas.h
• C:/Programme/Dev-Cpp/Mine/GENtle/SequenceCanvas.cpp

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