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TPhylip Class Reference

#include <TPhylip.h>

List of all members.

Public Member Functions

 TPhylip ()
 ~TPhylip ()
wxString protpars (wxString s)
wxString dnapars (wxString s)
wxString dnamove (wxString s)
wxString dnapenny (wxString s)
wxString dnacomp (wxString s)
wxString dnainvar (wxString s)
wxString dnaml (wxString s)
wxString dnamlk (wxString s)
wxString proml (wxString s)
wxString promlk (wxString s)
wxString dnadist (wxString s)
wxString protdist (wxString s)
wxString restdist (wxString s)
wxString restml (wxString s)
wxString seqboot (wxString s)
wxString fitch (wxString s)
wxString kitsch (wxString s)
wxString neighbor (wxString s)
wxString contml (wxString s)
wxString gendist (wxString s)
wxString contrast (wxString s)
wxString pars (wxString s)
wxString mix (wxString s)
wxString move (wxString s)
wxString penny (wxString s)
wxString dollop (wxString s)
wxString dolmove (wxString s)
wxString dolpenny (wxString s)
wxString clique (wxString s)
wxString factor (wxString s)
wxString drawgram (wxString s)
wxString drawtree (wxString s)
wxString treedist (wxString s)
wxString consense (wxString s)
wxString retree (wxString s)
void query_phylip_dir (bool setit=true)
bool IsOK ()

Private Member Functions

wxString runapp (wxString app, const wxString s)

Private Attributes

wxString phylip_dir


Constructor & Destructor Documentation

TPhylip::TPhylip  ) 
 

TPhylip::~TPhylip  ) 
 


Member Function Documentation

wxString TPhylip::clique wxString  s  ) 
 

wxString TPhylip::consense wxString  s  ) 
 

wxString TPhylip::contml wxString  s  ) 
 

wxString TPhylip::contrast wxString  s  ) 
 

wxString TPhylip::dnacomp wxString  s  ) 
 

wxString TPhylip::dnadist wxString  s  ) 
 

wxString TPhylip::dnainvar wxString  s  ) 
 

wxString TPhylip::dnaml wxString  s  ) 
 

wxString TPhylip::dnamlk wxString  s  ) 
 

wxString TPhylip::dnamove wxString  s  ) 
 

wxString TPhylip::dnapars wxString  s  ) 
 

wxString TPhylip::dnapenny wxString  s  ) 
 

wxString TPhylip::dollop wxString  s  ) 
 

wxString TPhylip::dolmove wxString  s  ) 
 

wxString TPhylip::dolpenny wxString  s  ) 
 

wxString TPhylip::drawgram wxString  s  ) 
 

wxString TPhylip::drawtree wxString  s  ) 
 

wxString TPhylip::factor wxString  s  ) 
 

wxString TPhylip::fitch wxString  s  ) 
 

wxString TPhylip::gendist wxString  s  ) 
 

bool TPhylip::IsOK  ) 
 

wxString TPhylip::kitsch wxString  s  ) 
 

wxString TPhylip::mix wxString  s  ) 
 

wxString TPhylip::move wxString  s  ) 
 

wxString TPhylip::neighbor wxString  s  ) 
 

wxString TPhylip::pars wxString  s  ) 
 

wxString TPhylip::penny wxString  s  ) 
 

wxString TPhylip::proml wxString  s  ) 
 

wxString TPhylip::promlk wxString  s  ) 
 

wxString TPhylip::protdist wxString  s  ) 
 

wxString TPhylip::protpars wxString  s  ) 
 

void TPhylip::query_phylip_dir bool  setit = true  ) 
 

wxString TPhylip::restdist wxString  s  ) 
 

wxString TPhylip::restml wxString  s  ) 
 

wxString TPhylip::retree wxString  s  ) 
 

wxString TPhylip::runapp wxString  app,
const wxString  s
[private]
 

wxString TPhylip::seqboot wxString  s  ) 
 

wxString TPhylip::treedist wxString  s  ) 
 


Member Data Documentation

wxString TPhylip::phylip_dir [private]
 


The documentation for this class was generated from the following files:
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