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TPrimer Member List

This is the complete list of members for TPrimer, including all inherited members.

aaCountTPrimer [private]
ann1TPrimer [private]
ann2TPrimer [private]
annealingVectorTPrimer
annmTPrimer [private]
annScoreTPrimer [private]
atCountTPrimer [private]
caCountTPrimer [private]
CalcIUpair(wxString base0, wxString base, int i, bool max)TPrimer [private]
cgCountTPrimer [private]
checkFit(TVector *v, bool justCount=false)TPrimer
contentsTPrimer [private]
CountNeighbors(wxString s)TPrimer [private]
ctCountTPrimer [private]
DeltaG(bool max)TPrimer [private]
deltaGValmaxTPrimer [private]
deltaGValminTPrimer [private]
DeltaH(bool max)TPrimer [private]
deltaHValmaxTPrimer [private]
deltaHValminTPrimer [private]
DeltaS(bool max)TPrimer [private]
deltaSValmaxTPrimer [private]
deltaSValminTPrimer [private]
evaluate(float tm_opt=0)TPrimer
evaluateSelfAnnealing()TPrimer [private]
evaluateTm(double conc_nm=50, double Na_mm=50)TPrimer [private]
evaluationTPrimer [private]
fromTPrimer
gaCountTPrimer [private]
gcCountTPrimer [private]
get35sequence()TPrimer
get53sequence()TPrimer
getAnnealingSequence()TPrimer [private]
getEvaluation()TPrimer
getGCcontents()TPrimer
getName()TPrimer
getSequenceFromVector(TVector *v, bool from3=false)TPrimer
getTm(int type=TM_STANDARD)TPrimer
ggCountTPrimer [private]
gtCountTPrimer [private]
HTPrimer [private]
invertSequence()TPrimer [private]
IsBase(wxString theBase)TPrimer [private]
IsIUpacBase(wxString theBase)TPrimer [private]
IUpairVals_maxTPrimer [private]
IUpairVals_minTPrimer [private]
makeStats()TPrimer
nameTPrimer [private]
NeighbourTM(bool max, double pconc, double saltconc)TPrimer [private]
OligoCount()TPrimer [private]
overlap(TPrimer &op)TPrimer
pgcTPrimer [private]
report()TPrimer
STPrimer [private]
sequenceTPrimer
setName(wxString nn)TPrimer
taCountTPrimer [private]
tmTPrimer [private]
tm_gcTPrimer [private]
tm_saltTPrimer [private]
toTPrimer
TPrimer(int _from=0, int _to=0, bool _upper=true)TPrimer
upperTPrimer
~TPrimer()TPrimer [inline]


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