TRestrictionCut Class Reference

Stores a specific cut of a restriction enzyme. More...

#include <RestrictionEnzymes.h>

List of all members.

Public Member Functions
	TRestrictionCut (int _pos, TRestrictionEnzyme *_e, bool _first_strand=true)
	~TRestrictionCut ()
void	linearUpdate (int w, int h)
	Dummy destructor.
wxString	getNameAndPosition ()
	Returns the enzyme name and cut pusition.
bool	isHidden (TVector *v)
	Is this enzyme in this TVector hidden?
wxString	getDisplayName ()
	Returns the enzyme name (or the joined names).
bool	join (TRestrictionCut *c)
	Merges a cut with an isoenzyme for simplified display.
wxString	getEndUpperLeft ()
	The "upper left" sequence after the cut.
wxString	getEndLowerLeft ()
	The "lower left" sequence after the cut.
wxString	getEndUpperRight ()
	The "upper right" sequence after the cut.
wxString	getEndLowerRight ()
	The "lower right" sequence after the cut.
int	getCut ()
int	getOverlap ()
int	getPos ()
void	setPos (int p)
int	getFrom ()
int	getTo ()
wxString	getSequence ()
Public Attributes
TRestrictionEnzyme *	e
	Cutting enzyme.
wxString	display_name
	The name to display.
float	angle
float	angle3
float	r1
float	r2
float	r3
wxRect	lastrect
wxPoint	p
wxPoint	lp
wxTreeItemId	treeid
	ID of the cut in the TVectorTree.
Private Attributes
int	pos
	Position of the cut.
bool	first_strand

---

Detailed Description

Stores a specific cut of a restriction enzyme.

---

Constructor & Destructor Documentation

TRestrictionCut::TRestrictionCut (  int  _pos, TRestrictionEnzyme *  _e, bool  _first_strand = true )  [inline]

Parameters: _first_strand  Constructor

TRestrictionCut::~TRestrictionCut (   )  [inline]

---

Member Function Documentation

int TRestrictionCut::getCut (   )

wxString TRestrictionCut::getDisplayName (   )

Returns the enzyme name (or the joined names).

wxString TRestrictionCut::getEndLowerLeft (   )

The "lower left" sequence after the cut.

wxString TRestrictionCut::getEndLowerRight (   )

The "lower right" sequence after the cut.

wxString TRestrictionCut::getEndUpperLeft (   )

The "upper left" sequence after the cut.

wxString TRestrictionCut::getEndUpperRight (   )

The "upper right" sequence after the cut.

int TRestrictionCut::getFrom (   )

wxString TRestrictionCut::getNameAndPosition (   )

Returns the enzyme name and cut pusition.

int TRestrictionCut::getOverlap (   )

int TRestrictionCut::getPos (   )

wxString TRestrictionCut::getSequence (   )

int TRestrictionCut::getTo (   )

bool TRestrictionCut::isHidden (  TVector *  v  )

Is this enzyme in this TVector hidden?

bool TRestrictionCut::join (  TRestrictionCut *  c  )

Merges a cut with an isoenzyme for simplified display. Parameters: c  The restriction cut to merge

void TRestrictionCut::linearUpdate (  int  w, int  h )

Dummy destructor. Parameters: w  Screen width h  Screen height

void TRestrictionCut::setPos (  int  p  )

---

Member Data Documentation

float TRestrictionCut::angle

float TRestrictionCut::angle3

wxString TRestrictionCut::display_name

The name to display.

TRestrictionEnzyme* TRestrictionCut::e

Cutting enzyme.

bool TRestrictionCut::first_strand [private]

wxRect TRestrictionCut::lastrect

wxPoint TRestrictionCut::lp

wxPoint TRestrictionCut::p

int TRestrictionCut::pos [private]

Position of the cut.

float TRestrictionCut::r1

float TRestrictionCut::r2

float TRestrictionCut::r3

wxTreeItemId TRestrictionCut::treeid

ID of the cut in the TVectorTree.

---

The documentation for this class was generated from the following files:

• C:/Programme/Dev-Cpp/Mine/GENtle/RestrictionEnzymes.h
• C:/Programme/Dev-Cpp/Mine/GENtle/RestrictionEnzymes.cpp

---