TRestrictionEnzyme Class Reference

Stores a restriction enzyme. More...

#include <RestrictionEnzymes.h>

List of all members.

Public Member Functions
	TRestrictionEnzyme ()
	~TRestrictionEnzyme ()
	Empty constructor.
bool	differ (TRestrictionEnzyme &e)
	Dummy destructor.
wxString	getEndUpperLeft (bool first_strand=true)
	The "upper left" sequence after the cut.
wxString	getEndLowerLeft (bool first_strand=true)
	The "lower left" sequence after the cut.
wxString	getEndUpperRight (bool first_strand=true)
	The "upper right" sequence after the cut.
wxString	getEndLowerRight (bool first_strand=true)
	The "lower right" sequence after the cut.
wxString	invertSequence ()
	The recognition sequence, inverted.
int	getCut (bool first_strand=true)
void	setCut (int c)
int	getOverlap (bool first_strand=true)
void	setOverlap (int o)
wxString	getName ()
void	setName (wxString _name)
wxString	getSequence ()
void	setSequence (wxString _seq)
bool	isPalindromic ()
Public Attributes
wxString	location
	The physical location of the vial containing the enzyme, if entered.
wxString	note
	A note about the enzyme, if entered.
unsigned long	dbid
	Database ID of the enzyme.
Private Attributes
wxString	name
	The enzyme name.
wxString	sequence
	The recognition sequence.
bool	palindromic
int	cut
	Where the cut occurs.
int	overlap
	Length of the sticky ends (negative=<--).

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Detailed Description

Stores a restriction enzyme.

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Constructor & Destructor Documentation

TRestrictionEnzyme::TRestrictionEnzyme (   )  [inline]

TRestrictionEnzyme::~TRestrictionEnzyme (   )  [inline]

Empty constructor.

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Member Function Documentation

bool TRestrictionEnzyme::differ (  TRestrictionEnzyme &  e  )

Dummy destructor. Parameters: e  The enzyme to compare this one to If any of name, sequence, note, location, cut, or overlap do not match, FALSE is returned

int TRestrictionEnzyme::getCut (  bool  first_strand = true  )

wxString TRestrictionEnzyme::getEndLowerLeft (  bool  first_strand = true  )

The "lower left" sequence after the cut.

wxString TRestrictionEnzyme::getEndLowerRight (  bool  first_strand = true  )

The "lower right" sequence after the cut.

wxString TRestrictionEnzyme::getEndUpperLeft (  bool  first_strand = true  )

The "upper left" sequence after the cut.

wxString TRestrictionEnzyme::getEndUpperRight (  bool  first_strand = true  )

The "upper right" sequence after the cut.

wxString TRestrictionEnzyme::getName (   )

int TRestrictionEnzyme::getOverlap (  bool  first_strand = true  )

wxString TRestrictionEnzyme::getSequence (   )

wxString TRestrictionEnzyme::invertSequence (   )

The recognition sequence, inverted.

bool TRestrictionEnzyme::isPalindromic (   )

void TRestrictionEnzyme::setCut (  int  c  )

void TRestrictionEnzyme::setName (  wxString  _name  )

void TRestrictionEnzyme::setOverlap (  int  o  )

void TRestrictionEnzyme::setSequence (  wxString  _seq  )

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Member Data Documentation

int TRestrictionEnzyme::cut [private]

Where the cut occurs.

unsigned long TRestrictionEnzyme::dbid

Database ID of the enzyme.

wxString TRestrictionEnzyme::location

The physical location of the vial containing the enzyme, if entered.

wxString TRestrictionEnzyme::name [private]

The enzyme name.

wxString TRestrictionEnzyme::note

A note about the enzyme, if entered.

int TRestrictionEnzyme::overlap [private]

Length of the sticky ends (negative=<--).

bool TRestrictionEnzyme::palindromic [private]

wxString TRestrictionEnzyme::sequence [private]

The recognition sequence.

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The documentation for this class was generated from the following files:

• C:/Programme/Dev-Cpp/Mine/GENtle/RestrictionEnzymes.h
• C:/Programme/Dev-Cpp/Mine/GENtle/RestrictionEnzymes.cpp

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