TSequencingPrimerDialog Class Reference

The dialog for settings when searching for sequencing primers. More...

#include <MiscDialogs.h>

List of all members.

Public Member Functions
	TSequencingPrimerDialog (wxWindow *parent, const wxString &title)
	Constructor.
	~TSequencingPrimerDialog ()
	Destructor.
virtual void	OnCharHook (wxKeyEvent &event)
	Key event handler.
virtual void	OnDB (wxCommandEvent &event)
	Second database event handler.
virtual void	getPrimerList (wxArrayString &p_name, wxArrayString &p_seq)
	Retrieve a list of primers.
virtual bool	matchToVector (TVector *v, wxString name, wxString seq)
	Match the primers to the vector.
virtual bool	getClear ()
	Clear existing sequencing primer items from vecotr?
Private Member Functions
virtual int	findBestMatch (wxString &s, wxString seq, int &pos, int ml)
	Finds the best match for a primer in the vector.
virtual void	addSequencingPrimer (TVector *v, wxString name, wxString seq, int best_pos, int best_score, int dir)
	Add the primer as an item to the vector.
Private Attributes
wxSpinCtrl *	t_ma
	Minimum number of aligning bases.
wxChoice *	c_db
wxChoice *	c_pj
wxCheckBox *	cb_pj
wxCheckBox *	cb_clear
wxCheckBox *	cb_35
wxCheckBox *	cb_53
wxArrayString	db_names
wxArrayString	db_files

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Detailed Description

The dialog for settings when searching for sequencing primers.

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Constructor & Destructor Documentation

TSequencingPrimerDialog::TSequencingPrimerDialog (  wxWindow *  parent, const wxString &  title )

Constructor.

TSequencingPrimerDialog::~TSequencingPrimerDialog (   )

Destructor.

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Member Function Documentation

void TSequencingPrimerDialog::addSequencingPrimer (  TVector *  v, wxString  name, wxString  seq, int  best_pos, int  best_score, int  dir )  [private, virtual]

Add the primer as an item to the vector.

int TSequencingPrimerDialog::findBestMatch (  wxString &  s, wxString  seq, int &  pos, int  ml )  [private, virtual]

Finds the best match for a primer in the vector.

virtual bool TSequencingPrimerDialog::getClear (   )  [inline, virtual]

Clear existing sequencing primer items from vecotr?

void TSequencingPrimerDialog::getPrimerList (  wxArrayString &  p_name, wxArrayString &  p_seq )  [virtual]

Retrieve a list of primers.

bool TSequencingPrimerDialog::matchToVector (  TVector *  v, wxString  name, wxString  seq )  [virtual]

Match the primers to the vector.

void TSequencingPrimerDialog::OnCharHook (  wxKeyEvent &  event  )  [virtual]

Key event handler.

void TSequencingPrimerDialog::OnDB (  wxCommandEvent &  event  )  [virtual]

Second database event handler.

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Member Data Documentation

wxChoice* TSequencingPrimerDialog::c_db [private]

wxChoice * TSequencingPrimerDialog::c_pj [private]

wxCheckBox * TSequencingPrimerDialog::cb_35 [private]

wxCheckBox * TSequencingPrimerDialog::cb_53 [private]

wxCheckBox * TSequencingPrimerDialog::cb_clear [private]

wxCheckBox* TSequencingPrimerDialog::cb_pj [private]

wxArrayString TSequencingPrimerDialog::db_files [private]

wxArrayString TSequencingPrimerDialog::db_names [private]

wxSpinCtrl* TSequencingPrimerDialog::t_ma [private]

Minimum number of aligning bases.

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The documentation for this class was generated from the following files:

• C:/Programme/Dev-Cpp/Mine/GENtle/MiscDialogs.h
• C:/Programme/Dev-Cpp/Mine/GENtle/MiscDialogs.cpp

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