TVectorItem Class Reference

This class stores a vector item. More...

#include <TVector.h>

List of all members.

Public Member Functions
	TVectorItem ()
	Default constructor.
	TVectorItem (wxString sn, wxString n, int f, int t, char ty)
	Constructor.
	~TVectorItem ()
wxBrush *	getBrush ()
	Returns a pointer to the brush used to draw the item.
wxColour	getFontColor ()
	Returns the font color.
void	setColor (wxColour col)
	Sets the font color.
bool	isVisible ()
	Is this item visible?
void	setVisible (bool b)
	Set visibility.
int	getRF ()
	Returns the reading frame.
void	setRF (int x)
	Sets the reading frame.
int	getOffset ()
	returns the offset; -1 = no offset
void	setOffset (int o=-1)
	Sets the offset; -1 = no offset.
void	setType (wxString s)
	Sets the item type.
int	getOffsetAt (int i)
	Returns the offset of the item at a specific position.
void	doRemove (int f, int t, int l)
	Remove a part of the item.
wxString	implodeParams ()
	Join item parameters for storage.
void	explodeParams (wxString _s)
	Extract item parameters from stored form.
wxTreeItemId	getTreeID ()
void	setTreeID (wxTreeItemId newid)
	Set new item ID in TVectorTree.
int	getDirection ()
	Return the direction.
void	setDirection (int newdir)
	Set the direction.
char	getType ()
	Returns the item type.
void	setType (char newtype)
	Sets the item type.
int	getMem ()
	Estimates the memory usage of this item (debugging use only).
wxString	getParam (wxString p, wxString def=_T(""))
	Returns the value of a parameter; optional default value.
wxArrayString	getParamKeys ()
	Get a list of all parameter keys.
void	setParam (wxString p, wxString v)
	Set a parameter key/value pair.
void	setParam (wxString p, int v)
	Set a parameter key/value pair.
void	translate (TVector *v, SeqAA *aa, vector< Tdna2aa > &dna2aa)
	Translate DNA to amino acids.
void	getArrangedAA (TVector *v, wxString &s, int disp, SeqAA *aa=NULL)
	Generate the amino acid sequence in place.
wxString	getAminoAcidSequence ()
	Return the amino acid sequence.
void	setLastVector (TVector *v)
	Set the last TVector to own this item.
Public Attributes
wxString	desc
	Item description.
wxString	name
	Item name.
int	from
	Item start.
int	to
	Item end.
Private Member Functions
void	initParams ()
	Reset parameters.
Private Attributes
signed char	direction
	The item direction; 1=clockwise, -1=counter-clockwise.
char	type
	The type of the item in VIT_XXX form.
wxTreeItemId	treeid
	The item ID in the TVectorTree.
wxArrayString	pname
	Parameter keys.
wxArrayString	pvalue
	Parameter values.
vector< Tdna2aa >	dna2aa_item
	The cache of the translated amino acids.
TVector *	lastVector
	The last TVector to own this item.
int	r1
int	r2
int	r3
int	r4
float	a1
float	a2
Friends
class	TVectorEditor
class	MyChild
class	PlasmidCanvas
class	MyFrame

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Detailed Description

This class stores a vector item.

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Constructor & Destructor Documentation

TVectorItem::TVectorItem (   )

Default constructor.

TVectorItem::TVectorItem (  wxString  sn, wxString  n, int  f, int  t, char  ty )

Constructor.

TVectorItem::~TVectorItem (   )  [inline]

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Member Function Documentation

void TVectorItem::doRemove (  int  f, int  t, int  l )

Remove a part of the item.

void TVectorItem::explodeParams (  wxString  _s  )

Extract item parameters from stored form.

wxString TVectorItem::getAminoAcidSequence (   )

Return the amino acid sequence.

void TVectorItem::getArrangedAA (  TVector *  v, wxString &  s, int  disp, SeqAA *  aa = NULL )

Generate the amino acid sequence in place.

wxBrush * TVectorItem::getBrush (   )

Returns a pointer to the brush used to draw the item.

int TVectorItem::getDirection (   )  [inline]

Return the direction.

wxColour TVectorItem::getFontColor (   )

Returns the font color.

int TVectorItem::getMem (   )

Estimates the memory usage of this item (debugging use only).

int TVectorItem::getOffset (   )

returns the offset; -1 = no offset

int TVectorItem::getOffsetAt (  int  i  )

Returns the offset of the item at a specific position.

wxString TVectorItem::getParam (  wxString  p, wxString  def = _T("") )

Returns the value of a parameter; optional default value.

wxArrayString TVectorItem::getParamKeys (   )

Get a list of all parameter keys.

int TVectorItem::getRF (   )

Returns the reading frame.

wxTreeItemId TVectorItem::getTreeID (   )  [inline]

char TVectorItem::getType (   )  [inline]

Returns the item type.

wxString TVectorItem::implodeParams (   )

Join item parameters for storage.

void TVectorItem::initParams (   )  [private]

Reset parameters.

bool TVectorItem::isVisible (   )

Is this item visible?

void TVectorItem::setColor (  wxColour  col  )

Sets the font color.

void TVectorItem::setDirection (  int  newdir  )  [inline]

Set the direction.

void TVectorItem::setLastVector (  TVector *  v  )

Set the last TVector to own this item.

void TVectorItem::setOffset (  int  o = -1  )

Sets the offset; -1 = no offset.

void TVectorItem::setParam (  wxString  p, int  v )

Set a parameter key/value pair.

void TVectorItem::setParam (  wxString  p, wxString  v )

Set a parameter key/value pair.

void TVectorItem::setRF (  int  x  )

Sets the reading frame.

void TVectorItem::setTreeID (  wxTreeItemId  newid  )  [inline]

Set new item ID in TVectorTree.

void TVectorItem::setType (  char  newtype  )  [inline]

Sets the item type.

void TVectorItem::setType (  wxString  s  )

Sets the item type.

void TVectorItem::setVisible (  bool  b  )

Set visibility.

void TVectorItem::translate (  TVector *  v, SeqAA *  aa, vector< Tdna2aa > &  dna2aa )

Translate DNA to amino acids.

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Friends And Related Function Documentation

friend class MyChild [friend]

friend class MyFrame [friend]

friend class PlasmidCanvas [friend]

friend class TVectorEditor [friend]

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Member Data Documentation

float TVectorItem::a1 [private]

float TVectorItem::a2 [private]

wxString TVectorItem::desc

Item description.

signed char TVectorItem::direction [private]

The item direction; 1=clockwise, -1=counter-clockwise.

vector<Tdna2aa> TVectorItem::dna2aa_item [private]

The cache of the translated amino acids.

int TVectorItem::from

Item start.

TVector* TVectorItem::lastVector [private]

The last TVector to own this item.

wxString TVectorItem::name

Item name.

wxArrayString TVectorItem::pname [private]

Parameter keys.

wxArrayString TVectorItem::pvalue [private]

Parameter values.

int TVectorItem::r1 [private]

int TVectorItem::r2 [private]

int TVectorItem::r3 [private]

int TVectorItem::r4 [private]

int TVectorItem::to

Item end.

wxTreeItemId TVectorItem::treeid [private]

The item ID in the TVectorTree.

char TVectorItem::type [private]

The type of the item in VIT_XXX form.

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The documentation for this class was generated from the following files:

• C:/Programme/Dev-Cpp/Mine/GENtle/TVector.h
• C:/Programme/Dev-Cpp/Mine/GENtle/TVector.cpp

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