Here is a list of all class members with links to the classes they belong to:
- a1
: TVectorItem
- a2
: TVectorItem
- a2i()
: TClone
- aa
: TVector, Tdna2aa, SeqAAstructure, TAutoAnnotateDialog
- AA2DNA
: TVector
- aa_color
: MyFrame
- aa_disp
: TPrimerDesign, MyChild
- aa_offset
: MyChild
- aa_state
: TPrimerDesign, MyChild
- aa_xref
: SeriesMat
- aaa
: SeqFeature, TAlignment
- aacol
: ProgramOptionsDialog
- aaCount
: TPrimer
- aaprop
: TVector
- aaSearch()
: FindSequenceDialog
- aaSubSearch()
: FindSequenceDialog
- abi
: TSequencingAssistantDialog
- abi1
: TSequencingAssistantDialog
- abi2
: TSequencingAssistantDialog
- ABItype()
: ABItype
- abort()
: TUndo
- accessDB()
: TManageDatabaseDialog
- ACGT
: TVector
- action
: TVector
- action_value
: TVector
- actionMode
: TManageDatabaseDialog
- Activate()
: ChildBase
- activateChild()
: MyFrame
- activating
: MyFrame
- Add()
: TiXmlAttributeSet, TGraphData
- add()
: TGelLane, SeqPos, SequencePartList
- add2cocktail()
: TRestrictionEditor
- add2gel
: TRestrictionEditor
- add_amino_acid()
: TIPC_PARS
- add_atom()
: SeqAAstructure
- add_bond()
: SeqAAstructure
- add_component()
: TIPC_PARS
- add_context_menu()
: TOnlineTools
- add_element()
: TIPC_ELEMENT
- add_error()
: PCR_troubleshoot_dialog
- add_final_piece()
: TProteolysis
- add_isotope()
: TIPC_ELEMENT
- add_nb_data()
: TGraphDialog
- add_nb_graph()
: TGraphDialog
- add_nb_scales()
: TGraphDialog
- add_new_point()
: GPOUT
- add_peak()
: TIPC
- add_siRNA()
: MyChild
- add_siRNA_sub()
: MyChild
- add_warning()
: PCR_troubleshoot_dialog
- addCCPFTools()
: MyFrame
- addChild()
: TMainTree
- addDatabase()
: TManageDatabaseDialog
- addDefaultTools()
: MyFrame
- addDescription()
: TVector
- addEnzymeGroup()
: TStorage
- addEnzymeToGroup()
: TStorage
- AddFontsizeTool()
: MyFrame
- addFragmentsToGel()
: MyChild
- addHighlight()
: SeqBasic
- addit
: ReadSeqVars
- addItem()
: TGenBank
- addItem2list()
: TVectorEditor
- additionalDatabase
: AutoAnnotate, TAutoAnnotateDialog
- addLine()
: AlignmentAppearanceDialog
- addline()
: SeqPos
- addName()
: TVector
- addNewGraph()
: TGraphDisplay
- addOkCancel()
: TVectorEditor
- addORFs()
: TVector, AutoAnnotate
- AddPrimer()
: TPrimerDesign
- addPrimer()
: SeqPrimer
- addRawData()
: TGraphDisplay
- addRawData2()
: TGraphDisplay
- addRestrictionEnzyme()
: TVector, TStorage
- addSequencingPrimer()
: TSequencingPrimerDialog
- addSpinCtrl()
: TPrimerDialog
- addTool()
: MyFrame
- addToSequence()
: TVector
- addVTname()
: TLigationDialog
- addXMLfeatureSlot()
: CGview
- after
: TFLAG
- aidLines
: TABIviewer
- al
: TAlignmentDialog
- alg
: TAlignmentDialog
- alg_match
: TAlignmentDialog
- alg_matrix
: TAlignmentDialog
- alg_mismatch
: TAlignmentDialog
- alg_penalty
: TAlignmentDialog
- algorithm
: TAlignment
- ali
: TPhyloTree, AlignmentAppearanceDialog
- AlignmentAppearanceDialog()
: AlignmentAppearanceDialog
- alignments
: TMainTree
- all
: TAlignmentDialog
- allDone
: ReadSeqVars
- allow_copy
: ChildBase
- allow_cut
: ChildBase
- allow_cut_removal
: TSilmutDialog
- allow_find
: ChildBase
- allow_paste
: ChildBase
- allow_print
: ChildBase
- allow_save
: ChildBase
- allow_undo
: ChildBase
- allowed_chars
: FindSequenceDialog
- alreadyin
: AutoAnnotate
- alternateName
: SeqDNA
- alterSequence()
: TVector
- amino_acids
: TMainTree
- amount
: ipc_compound
- analyze()
: TXMLfile
- analyzeProteases()
: SeqAA
- angle
: TRestrictionCut
- angle3
: TRestrictionCut
- ann1
: TPrimer
- ann2
: TPrimer
- annealingVector
: TPrimer
- annm
: TPrimer
- annScore
: TPrimer
- arg
: cmd_line_data
- arrange()
: SequenceCanvas, SeqPlot, SeqABI, SeqAAstructure, SeqAA, SeqRestriction, SeqAlign, SeqDNA, SeqDivider, SeqNum, SeqBasic, TCloningAssistantPanel
- arrange_direct()
: SeqPlot, SeqFeature, SeqABI, SeqAA, SeqPrimer, SeqDNA, SeqBasic
- arrangedExport()
: ChildBase
- arrangeRestrictionSitesCircular()
: PlasmidCanvas
- arrangeRestrictionSitesLinear()
: PlasmidCanvas
- ascent
: panel_data
- at
: SeqABI
- atCount
: TPrimer
- atseq
: prettyopts
- Attribute()
: TiXmlElement
- attributeSet
: TiXmlElement
- AutoAnnotate()
: AutoAnnotate
- AutoScale()
: TGraphDisplay, TGraphData
- autoUpdateSchema()
: TStorage
- averageY()
: TPTree
- b
: color
- b1
: EIpanel
- b2
: EIpanel
- b3
: EIpanel
- b_atg
: TVectorEditor
- b_dfg
: TVectorEditor
- b_dg
: TVectorEditor
- b_last
: EIpanel
- b_next
: EIpanel
- backcolor
: SequenceCharMarkup
- backgroundColor
: CGview
- backtranslate()
: TVector
- bAdd
: TVectorEditor
- base
: TUndo, TCloningAssistant
- base2color
: SeqABI
- basematch()
: TVector
- baseonlynum
: prettyopts
- bb
: TRestrictionEditor
- bb2
: TRestrictionEditor
- bCol
: TVectorEditor
- bcol1
: TEnzymeSettingsTab
- bcol2
: TEnzymeSettingsTab
- bcol3
: TEnzymeSettingsTab
- bDel
: TVectorEditor
- begin
: TClone_Gene
- bitmaps
: MyFrame
- Blank()
: TiXmlText
- blankline
: SequenceCanvas
- blast()
: MyFrame
- blast_align()
: EIpanel
- blast_res
: EIpanel
- blast_thread
: EIpanel
- blastAA()
: TVectorTree, SequenceCanvas, PlasmidCanvas
- blastDNA()
: TVectorTree, SequenceCanvas, PlasmidCanvas
- blastThread()
: blastThread
- blocksize
: SequenceCanvas
- bmp
: TMyImagePanel
- bmpdir
: MyApp
- bo
: TVectorEditor, TAlignmentDialog, ProgramOptionsDialog, TManageDatabaseDialog
- bold
: SequenceCharMarkup, AlignmentAppearanceDialog, TAlignment
- BollocksMenu()
: MyFrame
- border
: SequenceCanvas
- borderBottom
: SequenceCharMarkup
- borderLeft
: SequenceCharMarkup
- borderRight
: SequenceCharMarkup
- borders
: SequenceCharMarkup
- borderTop
: SequenceCharMarkup
- bottom
: TGraphScale
- box
: TPhyloTree
- brush
: TDDR
- brush_C
: SeqAAstructure
- brush_N
: SeqAAstructure
- brush_O
: SeqAAstructure
- brush_S
: SeqAAstructure
- btCC
: TRestrictionEditor
- btOK
: TRestrictionEditor
- bu
: TImageDisplay
- buffer
: TiXmlBase::StringToBuffer, TIMGreader
- c
: TMainTreeItem, MySplitter, FindSequenceDialog
- c1
: EIpanel
- c2
: EIpanel
- c_db
: TSequencingPrimerDialog
- c_pj
: TSequencingPrimerDialog
- ca
: TCloningAssistantPanel
- caCount
: TPrimer
- calc()
: TSilmutDialog
- calc_acr()
: TSilmutDialog
- calc_cut_list()
: TProteolysis
- calc_fragment_list()
: TProteolysis
- calc_points()
: GPOUT
- calc_spearation()
: TProteolysis
- calc_spearation_sub()
: TProteolysis
- CalcInternalRect()
: TGraphScale
- CalcIUpair()
: TPrimer
- calculate_peaks()
: TIPC
- calculateResultSequence()
: TPrimerDesign
- calculating
: TGridBasic
- callback
: panel_data
- callMiddleMouseButton()
: TAlignment
- callUpdateUndoMenu()
: TVector
- can
: SeqBasic
- caniclose()
: ChildBase
- canUndo()
: TUndo
- canvas
: TOnlineTools
- cap
: TDDR_Timer
- carbon
: TAAProp
- cb
: TImageDisplay
- cb_35
: TSequencingPrimerDialog
- cb_53
: TSequencingPrimerDialog
- cb_clear
: TSequencingPrimerDialog
- cb_directlines
: TPhyloTree
- cb_enzymes
: FindSequenceDialog
- cb_items
: FindSequenceDialog
- cb_label
: TVirtualGel
- cb_pj
: TSequencingPrimerDialog
- cb_sequence
: FindSequenceDialog
- cb_translation
: FindSequenceDialog
- ce
: TVectorEditor
- cf_f
: TAAProp
- cf_pa
: TAAProp
- cf_pb
: TAAProp
- cf_pt
: TAAProp
- cgCount
: TPrimer
- CGdialog
: CGdialog, CGview
- CGview()
: CGview
- cgviewapp
: CGview, CGdialog
- ch_data_pointstyle
: TGraphDialog
- ch_data_scalex
: TGraphDialog
- ch_data_scaley
: TGraphDialog
- ch_marker
: TVirtualGel
- ch_percent
: TVirtualGel
- ch_scales_type
: TGraphDialog
- chain
: tseqres
- changed
: TVector
- changes
: TSilmutItem
- charheight
: SequenceCanvas
- charwidth
: SequenceCanvas, panel_data
- check
: TMyMultipleChoiceDialog
- Check()
: TMyMultipleChoiceDialog
- check4success()
: TPDB
- check4update()
: MyFrame
- CheckAll()
: TMyMultipleChoiceDialog
- checkFit()
: TPrimer
- checkUpdate
: ProgramOptionsDialog, MyFrame
- Child()
: TiXmlHandle
- child
: SequenceCanvas, TOnlineTools
- ChildBase()
: ChildBase
- ChildElement()
: TiXmlHandle
- children
: TPTree, MyFrame, TDDR
- choice
: ReadSeqVars
- choosejar
: CGdialog
- CHOU_FASMAN
: SeqPlot
- chr
: TiXmlBase::Entity
- circular
: TVector
- circular_pos()
: PlasmidCanvas
- clb
: TMyMultipleChoiceDialog
- clean()
: TSQLresult
- cleanEnzymeGroupCache()
: TStorage
- cleanup()
: TVectorEditor, TClone, TGridBasic, SeqPos
- clear()
: TGelLane, TVector, TUndo
- Clear()
: TiXmlNode, TiXmlCursor, EILB
- clear_children()
: TDDR
- ClearError()
: TiXmlDocument
- clearHighlights()
: SeqBasic
- clearItemSelection()
: TVectorEditor
- ClearORFs()
: TVector
- ClearThis()
: TiXmlElement
- clique()
: TPhylip
- Clone()
: TiXmlDocument, TiXmlUnknown, TiXmlDeclaration, TiXmlText, TiXmlComment, TiXmlElement, TiXmlNode
- closeCircle()
: TVector
- clp
: MyApp
- cmp()
: TClone, TClone_Gene
- cnt
: TUndo
- cocktail
: TVector, TRestrictionEditor
- cocktailFragments
: TRestrictionEditor
- codon_table_names
: TVector
- codon_tables
: TVector
- codonhash
: FindSequenceDialog
- COILED_COIL
: SeqPlot
- col
: TiXmlCursor, TGraphScale, TGraphData
- col1
: TEnzymeRules, TEnzymeSettingsTab
- col2
: TEnzymeRules, TEnzymeSettingsTab
- col3
: TEnzymeRules, TEnzymeSettingsTab
- colAA
: TAlignment
- colCur
: TAlignment
- colDNA
: TAlignment
- collide()
: SeqFeature
- color_background
: AlignmentAppearanceDialog
- color_foreground
: AlignmentAppearanceDialog
- colormask
: panel_data
- colors
: TGraphDisplay, SeqABI, AlignmentAppearanceDialog
- cols()
: TSQLresult
- colscore
: panel_data
- Column()
: TiXmlBase
- COMMENT
: TiXmlNode
- commitEnzymes()
: TVectorEditor
- commitItems()
: TVectorEditor
- commitProteases()
: TVectorEditor
- commitVector()
: TVectorEditor
- commonVectorsDatabase
: AutoAnnotate
- COMPLEMENT
: TVector
- complement
: TransformSequenceDialog
- condenseWhiteSpace
: TiXmlBase
- conn
: TStorage
- cons
: TAlignment
- consense()
: TPhylip
- consensus
: panel_data
- consensusSequence
: TAlignment
- content
: TSQLresult
- contents
: TPrimer
- context_db
: TManageDatabaseDialog
- context_last_item
: PlasmidCanvas
- context_last_orf
: PlasmidCanvas
- context_last_rs
: PlasmidCanvas
- context_names
: TManageDatabaseDialog
- contextMenuPosition
: SequenceCanvas
- contml()
: TPhylip
- contrast()
: TPhylip
- convert()
: TUReadSeq
- convertSqlite2to3()
: TStorage
- ConvertUTF32ToUTF8()
: TiXmlBase
- copyDNA()
: TManageDatabaseDialog
- copyFile()
: myExternal
- copyFileHTTP()
: myExternal
- copyFileLocal()
: myExternal
- copySQLfields()
: TStorage
- CopyTo()
: TiXmlDocument, TiXmlUnknown, TiXmlDeclaration, TiXmlText, TiXmlComment, TiXmlElement, TiXmlNode
- count_blanks()
: TGenBank
- count_help()
: MyFrame
- countCodonTables()
: TVector
- countCuts()
: TVector
- countLeafs()
: TPTree
- countMethylationSites()
: TVector
- CountNeighbors()
: TPrimer
- countORFs()
: TVector
- countVectors()
: TXMLfile, TCloneManager
- cp
: TPrimerDialog
- cPlasmid
: MyChild
- create_fragments
: TProteolysis
- create_labels
: TProteolysis
- createDatabase()
: TStorage
- createDatabaseSqlite3()
: TStorage
- createFragments
: TRestrictionEditor
- createMySQLdb()
: TStorage
- CreateToolBar()
: ChildBase
- cSequence
: ChildBase
- ctCount
: TPrimer
- cur
: TIMGitem, TAlignmentDialog
- curDisplay
: TAminoAcids
- curseTargets()
: TLigationDialog
- Cursor()
: TiXmlParsingData
- cursor
: TiXmlParsingData
- cut
: TREcache, TProteaseCut, TProtease, TRestrictionEnzyme
- cut_peaks()
: TIPC
- cutcache
: TRestrictionEditor
- cutoff
: TVirtualGel
- cuts
: TSilmutItem, TProteolysis
- cutting_proteases
: TProteolysis
- d
: TMySQLDialog, TMyDropTarget
- d1
: SeqPlot
- d2
: SeqPlot
- d3
: SeqPlot
- data
: TTreeItem, TAAProp, TGraphDisplay, TCalculator, TGraphDialog, EILB, TFLAG
- data_color
: TGraphDialog
- data_h
: SeqPlot
- data_max
: SeqPlot
- data_min
: SeqPlot
- data_name
: TGraphDialog
- data_step
: SeqPlot
- database
: TVector, TAlignment
- datasize
: TFLAG
- datatype
: TFLAG
- db
: TProject
- db_file
: TManageDatabaseDialog
- db_files
: TSequencingPrimerDialog
- db_name
: TManageDatabaseDialog
- db_names
: TSequencingPrimerDialog
- dbcache
: MyFrame
- dbfile
: AutoAnnotate
- dbid
: TRestrictionEnzyme
- dbname
: TStorage, AutoAnnotate
- dbWarningIssued
: MyApp
- DECLARATION
: TiXmlNode
- dedigitize()
: TPTree
- def
: ChildBase
- default_group
: TEnzymeRules, TEnzymeSettingsTab
- defdb
: TManageDatabaseDialog
- deg1
: TORF
- deg2
: TORF
- deg2x()
: PlasmidCanvas
- deg2y()
: PlasmidCanvas
- degap
: prettyopts
- del_from_cocktail()
: TRestrictionEditor
- delDNA()
: TManageDatabaseDialog
- delete_enzyme_button
: TVectorEditor
- delProject()
: TManageDatabaseDialog
- DeltaG()
: TPrimer
- deltaG0()
: PCR_troubleshoot_dialog
- deltaG0_dimer()
: PCR_troubleshoot_dialog
- deltaGValmax
: TPrimer
- deltaGValmin
: TPrimer
- DeltaH()
: TPrimer
- deltaH
: TSantaLucia
- deltaH0()
: PCR_troubleshoot_dialog
- deltaHValmax
: TPrimer
- deltaHValmin
: TPrimer
- DeltaS()
: TPrimer
- deltaS
: TSantaLucia
- deltaS0()
: PCR_troubleshoot_dialog
- deltaSValmax
: TPrimer
- deltaSValmin
: TPrimer
- desc
: TVectorEditor, TVector, TVectorItem, TProteolysisSuggestion, TProject, TAminoAcids
- descent
: panel_data
- description
: TClone, TGenBank
- DeselItems()
: TVectorEditor
- determine_cuts()
: TProteolysis
- determine_marked_or_complete_sequence()
: TOnlineTools
- differ()
: TRestrictionEnzyme
- dir
: TMyImagePanel
- direction
: TVectorItem, TClone_Gene
- directlines
: TPhyloTree
- disp
: SeqAA
- display
: TGraphData
- display_name
: TRestrictionCut
- displayUpdate()
: TVector
- dist
: node
- dist1
: TORF
- dist2
: TORF
- Distance()
: TGraphData
- dna
: Tdna2aa, TSequencingAssistantDialog
- dna2aa()
: TVector
- dna2aa_item
: TVectorItem
- dna_marker
: MyFrame
- dnacomp()
: TPhylip
- dnadist()
: TPhylip
- dnainvar()
: TPhylip
- dnaml()
: TPhylip
- dnamlk()
: TPhylip
- dnamove()
: TPhylip
- dnapars()
: TPhylip
- dnapenny()
: TPhylip
- do_calcpi()
: TOnlineTools
- do_copy()
: TManageDatabaseDialog
- do_del()
: TManageDatabaseDialog
- do_drop()
: TCloningAssistantPanel
- do_elm()
: TOnlineTools
- do_gor()
: TOnlineTools
- do_highlight
: TDDR, FindSequenceDialog
- do_hnn()
: TOnlineTools
- do_jpred()
: TOnlineTools
- do_load()
: TManageDatabaseDialog
- do_load_DNA()
: TManageDatabaseDialog
- do_load_project()
: TManageDatabaseDialog
- do_motif_scan()
: TOnlineTools
- do_move()
: TManageDatabaseDialog
- do_my_ass()
: MyApp
- do_my_log()
: MyApp
- do_neb_cutter()
: TOnlineTools
- do_phobius()
: TOnlineTools
- do_poly_phobius()
: TOnlineTools
- do_pval_fpscan()
: TOnlineTools
- do_save_DNA()
: TManageDatabaseDialog
- do_save_project()
: TManageDatabaseDialog
- doAction()
: TVector, FindSequenceDialog
- doAddORFs
: AutoAnnotate, TAutoAnnotateDialog
- DOCUMENT
: TiXmlNode
- document
: TiXmlAttribute
- does_match()
: TProtease
- doesHit()
: SeqFeature
- doesMatch()
: FindSequenceDialog
- doesNameExist()
: TManageDatabaseDialog
- doExport()
: TGenBank, ChildBase, TAlignment
- doExtractAA()
: MyChild
- doHide()
: SequenceCanvas
- doLigate
: TLigationDialog
- dollop()
: TPhylip
- dolmove()
: TPhylip
- doLoad
: TManageDatabaseDialog
- dolpenny()
: TPhylip
- domatch
: prettyopts
- doMatch()
: TLigationDialog
- done
: ReadSeqVars
- doOverwrite()
: SequenceCanvas
- doPause
: TSpeakDialog
- doPlay
: TSpeakDialog
- doRegisterStuff
: ProgramOptionsDialog, MyFrame
- doRemove()
: TVector, TVectorItem
- doRemoveNucleotide()
: TVector
- doRestriction()
: TVector
- doSave
: TManageDatabaseDialog
- doShowPrimer()
: TPrimerDesign
- doTransformSequence()
: MyChild
- DoubleValue()
: TiXmlAttribute
- down
: SeqRestriction
- Drag()
: TGraphScale
- drag_diff
: TCloningAssistantPanel
- draggable
: TDDR
- dragging
: TCloningAssistantPanel, TDDR
- draggingRect
: TGraphDisplay
- draw()
: TIMGitem, SequenceCharMarkup, TDDR
- draw_amino_acid()
: SeqAAstructure
- draw_gel()
: TProteolysis
- drawall
: SequenceCanvas
- drawBand()
: TMyGelControl
- drawCircularORFs()
: PlasmidCanvas
- drawDottedLine()
: SeqPlot
- drawgram()
: TPhylip
- drawing
: SequenceCanvas
- DrawIntoBitmap()
: TGraphDisplay
- drawit()
: TGraphDisplay, TGraphScale, TGraphData
- drawLinearItem()
: PlasmidCanvas
- drawLinearORFs()
: PlasmidCanvas
- DrawMark()
: TGraphScale
- drawn
: TGraphData
- drawRecursive()
: TPTree
- DrawSymbol()
: TGraphData
- drawSymbol()
: SeqPlot
- drawTopLine()
: SeqABI
- drawtree()
: TPhylip
- duplicate_from()
: TDDR
- dx
: TGraphData
- dy
: TGraphData
- dying
: MyFrame
- e
: TSilmutItem, TRestrictionCut, TEnzymeDialog
- e_diduseit
: TVectorEditor
- eb_from
: TEnzymeDialog
- eb_loc
: TEnzymeDialog
- eb_name
: TEnzymeDialog
- eb_note
: TEnzymeDialog
- eb_seq
: TEnzymeDialog
- eb_to
: TEnzymeDialog
- edit_id
: SequenceCanvas
- edit_valid
: SequenceCanvas
- editAppearance()
: TAlignment
- editCharPressed()
: SequenceCanvas
- editFeatureMode
: ProgramOptionsDialog, MyFrame
- editMode
: SeqBasic, SequenceCanvas
- editProtease()
: TVectorEditor
- editSequence()
: SequenceCanvas
- editSpecialKeyPressed()
: SequenceCanvas
- egr
: TSilmutDialog
- eig
: TVectorEditor
- EILB()
: EILB
- EIpanel()
: EIpanel
- el
: TRestrictionEditor
- el2
: TRestrictionEditor
- Element()
: TiXmlHandle
- element
: TIPC
- ELEMENT
: TiXmlNode
- ELEMENTFILE
: TIPC_ELEMENT
- elements
: TIPC_ELEMENT
- Encoding()
: TiXmlDeclaration
- encoding
: TiXmlDeclaration
- end
: TClone_Gene, rangeNum
- endnumberlength
: SeqBasic
- endRecord()
: TStorage
- EnforceRefesh()
: MyChild, TCloningAssistant, ChildBase
- enhancedDisplay
: ProgramOptionsDialog
- enhancedRefresh
: MyFrame
- ensureVisible()
: SequenceCanvas
- entity
: TiXmlBase
- Entry()
: blastThread, TAlignment
- enzroot
: TVectorTree
- enzyme
: TREcache
- enzyme_rules
: TVector, TProject
- enzymeAddEn()
: TVectorEditor
- enzymeAddGr()
: TVectorEditor
- enzymeAddToGr()
: TVectorEditor
- enzymeAddToNewGr()
: TVectorEditor
- enzymeDelEn()
: TVectorEditor
- enzymeDelFromGr()
: TVectorEditor
- enzymeDelGr()
: TVectorEditor
- enzymeGroupCache
: TStorage
- enzymeGroupNameCache
: TStorage
- enzymeImportRebase()
: TVectorEditor
- enzymeListDlbClick()
: TVectorEditor
- enzymeReallyDeleteEnzyme()
: TVectorEditor
- enzymes
: TClone
- enzymeSelChange()
: TVectorEditor
- eraseSequence()
: TVector
- err
: ReadSeqVars
- Error()
: TiXmlDocument
- error
: TUReadSeq, TStorage, TiXmlDocument
- ErrorCol()
: TiXmlDocument
- ErrorDesc()
: TiXmlDocument
- errorDesc
: TiXmlDocument
- ErrorId()
: TiXmlDocument
- errorId
: TiXmlDocument
- errorLocation
: TiXmlDocument
- ErrorRow()
: TiXmlDocument
- errorString
: TiXmlBase
- errout
: MyApp
- est
: TIPCDialog
- estimate_time()
: TIPCDialog
- evaluate()
: TPrimer
- evaluate_key_value()
: TVector
- evaluateSelfAnnealing()
: TPrimer
- evaluateTm()
: TPrimer
- evaluation
: TPrimer
- ex
: blastThread
- execute_blast()
: EIpanel
- execute_blast_b3()
: EIpanel
- execute_ncbi()
: EIpanel
- execute_ncbi_b3()
: EIpanel
- execute_ncbi_load()
: EIpanel
- expand()
: TGenBank
- explodeParams()
: TVectorItem
- exportVector()
: ChildBase
- ExternalInterface()
: ExternalInterface
- f
: ReadSeqVars, TMarkMem, hept_pref
- f_align
: TManageDatabaseDialog
- f_desc
: TManageDatabaseDialog
- f_dna
: TManageDatabaseDialog
- f_height
: TABIviewer
- f_primer
: TManageDatabaseDialog
- f_prot
: TManageDatabaseDialog
- f_seq
: TManageDatabaseDialog
- f_twopanes
: TManageDatabaseDialog
- f_width
: TABIviewer
- factor()
: TPhylip
- fast_calc
: TIPC
- features
: TAlignLine
- field
: TSQLresult
- file
: TMyImagePanel
- filename
: TUReadSeq, TClone, TABIviewer
- filestart
: ReadSeqVars
- fillSantaLucia()
: PCR_troubleshoot_dialog
- filter
: TManageDatabaseDialog
- filter_txt
: TManageDatabaseDialog
- filterDepth()
: TPTree
- Find()
: TiXmlAttributeSet
- find_button
: FindSequenceDialog
- find_cutting_proteases()
: TProteolysis
- find_item()
: TVector
- findBestMatch()
: TSequencingPrimerDialog
- findColors()
: TAlignment
- findID()
: SequenceCanvas
- findItem()
: TDDR
- findMouseTarget()
: SequenceCanvas
- findMouseTargetItem()
: SequenceCanvas
- findORFcircular()
: PlasmidCanvas
- findORFlinear()
: PlasmidCanvas
- FindOrigin()
: TAlignLine
- findRestrictionSite()
: PlasmidCanvas
- FindSequenceDialog()
: FindSequenceDialog
- findVectorObjectCircular()
: PlasmidCanvas
- findVectorObjectLinear()
: PlasmidCanvas
- First()
: TiXmlAttributeSet
- first
: range
- first_strand
: TRestrictionCut
- FirstAttribute()
: TiXmlElement
- FirstChild()
: TiXmlHandle, TiXmlNode
- firstChild
: TiXmlNode
- FirstChildElement()
: TiXmlHandle, TiXmlNode
- firstline
: AlignmentAppearanceDialog
- firstsel
: panel_data
- firstseq
: panel_data
- firstvcol
: panel_data
- firstvline
: panel_data
- fitch()
: TPhylip
- five
: TClone_Gene
- fix_percent()
: TMyGelControl
- fix_rev_compl()
: TSequencingAssistantDialog
- fixDNAname()
: TStorage
- fixMenus()
: TAlignment
- fixMinMax()
: SeqPlot
- fixOffsets()
: SeqAA
- fixQuotes()
: TManageDatabaseDialog
- flag
: cmd_line_data, TFLAG
- fname
: ReadSeqVars
- font
: SequenceCanvas
- font_name
: TIMGitem
- font_size
: TIMGitem
- fontColor
: SeqDNA
- fontsize
: TPrimerDesign, MyChild, TAminoAcids, TAlignment, TABIviewer
- footer
: panel_data
- force_add_line_number
: SeqBasic
- forceoverwrite
: SequenceCanvas
- forceOverwrite()
: SequenceCanvas
- format
: TUReadSeq
- fragments
: TSilmutItem, TProteolysis, TMainTree
- frame
: MyApp
- free_list()
: TIPC
- free_spectrum()
: GPOUT
- from
: TVectorItem, TORF, TSilmutDialog, TFragment, TPrimer, TPrimerDesign, TsiRNA, TAminoAcids, AlignmentAppearanceDialog, TABIviewer
- from_string()
: TEnzymeRules
- fromVector()
: TAlignment
- fullname
: TClone_Gene
- g
: TGraphDisplay, color
- gaCount
: TPrimer
- gap
: TAlignment
- gap_penalty
: TAlignment
- gapchar
: prettyopts
- gcCount
: TPrimer
- gd
: TGraph
- gel
: TProteolysis
- gendist()
: TPhylip
- generateConsensusSequence()
: TAlignment
- generateTargets()
: TLigationDialog
- genes
: TClone
- genomeMode
: TVector
- get35sequence()
: TPrimer
- get53sequence()
: TPrimer
- get_bx()
: SeqABI
- get_dimer_connections()
: PCR_troubleshoot_dialog
- get_fasta_name()
: TOnlineTools
- get_fasta_sequences()
: TOnlineTools
- get_from()
: TORF
- get_GENtle_version()
: MyApp
- get_halflife_text()
: TAAProp
- get_help()
: MyFrame
- get_inv_compl()
: TABIviewer
- get_matches()
: PCR_troubleshoot_dialog
- get_matrix()
: PCR_troubleshoot_dialog
- get_rf()
: TORF
- get_sub_desc()
: TXMLfile
- get_to()
: TORF
- get_token()
: TIPC_ELEMENT
- get_translation_table()
: TVector
- get_weight()
: TProteolysis
- get_y()
: TProteolysis
- getAA()
: SequenceCanvas
- getAAmw()
: TVector
- getAApi()
: TVector
- getAAprop()
: TVector
- getAAresult()
: TSilmutDialog
- getAAvector()
: TVector
- GetActiveChild()
: MyFrame
- getAll()
: TPTree
- getAln()
: SequenceCanvas
- getAminoAcidSequence()
: TVectorItem
- getAnnealingSequence()
: TPrimer
- getArrangedAA()
: TVectorItem
- getBaseColor()
: SeqABI, SeqDNA
- getBatchMark()
: SequenceCanvas
- getBrush()
: TVectorItem
- getCCW()
: TClone_Gene
- GetChar()
: TiXmlBase
- getCharMarkup()
: TAlignment
- getChildIndex()
: MyFrame
- getChildType()
: SequenceCanvas
- getClear()
: TSequencingPrimerDialog
- getCMBF()
: ABItype
- getCodonTableName()
: TVector
- getColor()
: TEnzymeRules
- getColorFromXML()
: SequenceCharMarkup
- getColorName()
: CGview
- getColorXML()
: SequenceCharMarkup
- getCommonParent()
: MyFrame
- getComplement()
: TVector
- GetCount()
: TGraphData
- getCurrentDepth()
: TPTree
- getCurrentItem()
: TVectorEditor
- getCurrentWeight()
: TPTree
- getCut()
: TRestrictionCut, TRestrictionEnzyme
- getcuts()
: TRestrictionEditor
- getCuts()
: TVector
- getDatabase()
: TVector
- getDatabaseList()
: TStorage
- getDBfromEnzymeGroup()
: TStorage
- getDBname()
: TStorage
- getDefaultDB()
: TStorage
- getDescription()
: TVector
- getDirection()
: TVectorItem
- getDisplayName()
: TRestrictionCut
- getDNAorAA()
: PlasmidCanvas
- GetDocument()
: TiXmlNode
- getDouble()
: TGridBasic
- getDrawAll()
: SequenceCanvas
- getEditMode()
: SequenceCanvas
- getEndLowerLeft()
: TRestrictionCut, TRestrictionEnzyme
- getEndLowerRight()
: TRestrictionCut, TRestrictionEnzyme
- getEndUpperLeft()
: TRestrictionCut, TRestrictionEnzyme
- getEndUpperRight()
: TRestrictionCut, TRestrictionEnzyme
- GetEntity()
: TiXmlBase
- getEnzyme()
: TSilmutDialog
- getEnzymeCache()
: TStorage
- getEnzymeGroups()
: TStorage
- getEnzymeRule()
: TVector
- getEnzymeRules()
: TVector, TProject
- getEnzymesInGroup()
: TStorage
- getEvaluation()
: TPrimer
- getExportFilters()
: ChildBase, TAlignment
- getFeatures()
: TAlignLine
- getFileFormatApplication()
: MyApp
- getFileFormatCommand()
: MyApp
- getFileMenu()
: MyFrame
- getFileName()
: TManageDatabaseDialog
- getFlag()
: ABItype
- getFontColor()
: TVectorItem
- getFormat()
: TUReadSeq
- getFragmentList()
: TRestrictionEditor
- getFrom()
: SequencePartList, TRestrictionCut
- getFromTo()
: FindSequenceDialog
- getGCcontents()
: TPrimer
- getGenomeMode()
: TVector
- getHelpMenu()
: MyFrame
- getHide()
: SequenceCanvas
- getHighlightColor()
: SeqBasic
- getHTMLCommand()
: MyApp
- getID()
: SequencePartList
- getInt()
: TIMGreader
- getInt1()
: ABItype
- getInt10()
: ABItype
- getInt2()
: ABItype
- getInt4()
: ABItype
- getItem()
: SeqAA, SeqDNA, SeqBasic, SeqPos
- getItemLength()
: TVector
- getItemsAtPosition()
: TVector
- getLanePos()
: TMyGelControl
- getLastMessage()
: TUndo
- getLastWhere()
: SequenceCanvas
- getLevel()
: SequencePartList
- getLine()
: SeqAA, SeqDNA, SeqBasic, SeqPos
- getLocalDBname()
: MyApp
- getMacOffset()
: ABItype
- getMark()
: SeqAA, SeqDNA, SeqBasic, PlasmidCanvas
- getmark()
: SeqPos
- getMarkFrom()
: PlasmidCanvas
- getMarkSequence()
: FindSequenceDialog
- getMarkSize()
: SeqAA, SeqDNA, SeqBasic
- getMarkTo()
: PlasmidCanvas
- getMaxDepth()
: TPTree
- getMaxWeight()
: TPTree
- getMem()
: TVector, TVectorItem
- GetMenuBar()
: ChildBase
- getMethylationSite()
: TVector
- getMethylationSiteIndex()
: TVector
- GetMyClientSize()
: TVectorEditor
- getName()
: TVirtualGel, TVector, TPrimer, TPhyloTree, TPTree, TImageDisplay, TGraph, TCalculator, TRestrictionEnzyme, TPrimerDesign, MyChild, ExternalInterface, TCloningAssistant, ChildBase, TAminoAcids, TAlignment, TABIviewer
- getNameAndPosition()
: TRestrictionCut
- getNucleotide()
: TVector
- getObject()
: TStorage
- getObject_MySQL()
: TStorage
- getObjectSqlite2()
: TStorage
- getObjectSqlite3()
: TStorage
- getOffset()
: TVectorItem
- getOffsetAt()
: TVectorItem
- getOption()
: TStorage
- getORF()
: TVector
- getOverlap()
: TRestrictionCut, TRestrictionEnzyme
- getParam()
: TVector, TVectorItem
- getParamKeys()
: TVectorItem
- getParams()
: TVector
- getPascalString()
: TFLAG
- getPCR_DNA_vector()
: SequenceCanvas
- getPD()
: SequenceCanvas
- getPenFromXML()
: SequenceCharMarkup
- getPenXML()
: SequenceCharMarkup
- getPos()
: SeqAA, SeqDNA, SeqBasic, TRestrictionCut
- getPrimerList()
: TSequencingPrimerDialog
- getPrintToColor()
: SequenceCanvas
- getProtease()
: TStorage
- getQuery()
: FindSequenceDialog
- getRealBegin()
: TClone_Gene
- GetRealCoord()
: TGraphScale
- getRealEnd()
: TClone_Gene
- getRealOffset()
: TDDR
- getRecord()
: ABItype
- getRecordPascalString()
: ABItype
- getRecordValue()
: ABItype
- getRect()
: SeqAA, SeqDNA, SeqBasic
- getRectSize()
: SeqAA, SeqDNA, SeqBasic
- getRestrictionEnzyme()
: TStorage
- getRF()
: TVectorItem
- getSafeXML()
: SequenceCharMarkup
- getSelectedListItems()
: TManageDatabaseDialog
- getSelection()
: SequenceCanvas, PlasmidCanvas
- getSeqType()
: TUReadSeq
- getSequence()
: TVector, TSilmutDialog, TRestrictionCut, TRestrictionEnzyme, ABItype
- getSequenceBitmap()
: SequenceCanvas
- getSequenceChar()
: TVector
- getSequenceFromVector()
: TPrimer
- getSequenceLength()
: TVector
- getSequenceNames()
: TUReadSeq
- getSequencePointer()
: TVector
- getSequences()
: TUReadSeq
- getSingleField()
: TStorage
- getSLindex()
: PCR_troubleshoot_dialog
- getStat()
: TABIviewer
- getStickyEnd()
: TVector
- getStr()
: ABItype
- getStrand35()
: TVector
- getStrand53()
: TVector
- getSubstring()
: TVector
- getTempDB()
: MyFrame, TManageDatabaseDialog
- getText()
: TORF, myExternal, ABItype
- getTextFTP()
: myExternal
- getTextHTTP()
: myExternal
- getTextLocal()
: myExternal
- getTip()
: SeqPlot
- getTm()
: TPrimer
- getTo()
: SequencePartList, TRestrictionCut
- GetToolBar()
: ChildBase
- getToolMenu()
: MyFrame
- GetTotalWidth()
: TGraphScale
- getTreeID()
: TVectorItem
- getType()
: TVector, TVectorItem
- GetUserData()
: TiXmlBase
- getVector()
: TXMLfile, TCloneManager
- getVectorCuts()
: TVector, TEnzymeRules
- getVIName()
: TLigationDialog
- GetVirtualCoordinate()
: TGraphScale
- GetVisibleWidth()
: TGraphScale
- getWeight()
: TPTree
- GetWidth()
: TGraphScale
- getWriteProtect()
: TStorage
- getXML()
: SequenceCharMarkup, CGview
- getZoom()
: PlasmidCanvas
- ggCount
: TPrimer
- gl
: TRestrictionEditor
- global_enzyme_rules
: MyFrame
- globalEnzymesPanel
: ProgramOptionsDialog
- globalSettingsPanel
: ProgramOptionsDialog
- gpout
: TIPC
- GPOUT
: GPOUT, TIPC
- grade
: TProteolysisSuggestion
- gridSetEditable()
: TGridBasic
- gridSetEntry()
: TGridBasic
- gridSetValue()
: TGridBasic
- gtCount
: TPrimer
- guessOptNuc()
: TPrimerDesign
- i
: TMyImagePanel, menu_item
- icb
: TVectorEditor
- ichoice
: TVectorEditor
- icv
: TVectorEditor
- id
: SeqFeature, SeqAlign
- Identify()
: TiXmlNode
- idesc
: TVectorEditor
- ierror
: TStorage
- ifrom
: TVectorEditor
- ignore
: TProteolysis, SequenceCharMarkup
- il
: TManageDatabaseDialog
- imageformat
: CGview
- imagetypes
: CGdialog
- imdi
: TMyImagePanel
- implodeParams()
: TVectorItem
- import()
: TStorage
- importCloneEnzymes()
: TVectorEditor
- importFile()
: MyFrame
- iname
: TVectorEditor
- index
: panel_data
- init()
: TVector, TLigationDialog, TGraphDisplay, TGridData, TGridProtein, TGridDNA, TGridLigation, SeqPlot, SeqBasic, TEnzymeRules, TOnlineTools, ChildBase
- init_blast()
: EIpanel
- init_disp()
: TAlignmentDialog
- init_elements()
: TIPC_ELEMENT
- init_how()
: TAlignmentDialog
- init_ncbi()
: EIpanel
- init_txt()
: MyApp
- init_what()
: TAlignmentDialog
- initCopynMove()
: TManageDatabaseDialog
- initDatabases()
: TManageDatabaseDialog
- initFromFile()
: SeqABI
- initFromString()
: SeqAA
- initFromTVector()
: SeqPlot, SeqFeature, SeqAA, SeqRestriction, SeqPrimer, SeqDNA, SeqDivider, SeqBasic
- initGlobalEnzymes()
: ProgramOptionsDialog
- initGlobalSettings()
: ProgramOptionsDialog
- initHelp()
: ChildBase
- initialclick
: PlasmidCanvas
- initialViewEnzyme()
: TVectorEditor
- initialViewItem()
: TVectorEditor
- initlb()
: TItemEditDialog
- initme()
: TVirtualGel, TVectorTree, TSilmutDialog, TRestrictionEditor, TPrimerDialog, TPhyloTree, TMainTree, TImageDisplay, TGraph, TCalculator, TPrimerDesign, MyFrame, MyChild, TEnzymeDialog, ExternalInterface, TCloningAssistant, TAminoAcids, TAlignment, TABIviewer
- initMenus()
: MyChild
- initPanels()
: MyChild
- initPanEnzym()
: TVectorEditor
- initPanEnzym2()
: TVectorEditor
- initPanItem()
: TVectorEditor
- initPanProp()
: TVectorEditor
- initPanProt()
: TVectorEditor
- initParams()
: TVectorItem
- initRestrictionPage()
: TRestrictionEditor
- initToolbar()
: MyChild
- InitToolBar()
: MyFrame
- inlinePlot
: TAminoAcids
- inMainTree
: ChildBase
- inMarkRange()
: SequenceCanvas
- inner
: TGraphDisplay
- insert_char()
: TVector
- insert_new_child()
: TDDR
- InsertAfterChild()
: TiXmlNode
- InsertBeforeChild()
: TiXmlNode
- InsertEndChild()
: TiXmlNode
- insertRestrictionSite()
: SequenceCanvas
- instance
: TFLAG
- interline
: prettyopts
- intersects()
: PlasmidCanvas
- intersectsLine()
: PlasmidCanvas
- IntValue()
: TiXmlAttribute
- inv_compl
: SeqABI, TABIviewer
- invalidate()
: TOnlineTools
- invers
: SeqDNA
- invert
: TVector, TLigationDialog, PCR_troubleshoot_dialog, TMyImagePanel, TImageDisplay, TransformSequenceDialog
- invertSequence()
: TPrimer, TRestrictionEnzyme
- invokeItemPopup()
: PlasmidCanvas
- invokeORFpopup()
: PlasmidCanvas
- invokeOriginal()
: TAlignment
- invokeRsPopup()
: PlasmidCanvas
- invokeVectorEditor()
: PlasmidCanvas, TAminoAcids
- invokeVectorPopup()
: PlasmidCanvas
- invs
: TAlignment
- ipc
: TIPC_PARS, GPOUT, TIPC_ELEMENT
- ipc_main()
: TIPC
- ipc_main2()
: TIPC
- irb
: TVectorEditor
- is_only_view()
: TABIviewer
- is_symbol()
: TIPC_PARS
- isAA()
: TAlignment
- isActivating()
: MyFrame
- isactive
: prettyopts
- IsAlpha()
: TiXmlBase
- IsAlphaNum()
: TiXmlBase
- IsBase()
: TPrimer
- isblank
: TGenBank
- isblankorquote
: TGenBank
- isChanged()
: TVector
- IsChecked()
: TMyMultipleChoiceDialog
- isCircular()
: TVector
- isDisplayOnly()
: SeqFeature, SeqRestriction, SeqBlank, SeqDivider, SeqNum, SeqBasic
- isDNA()
: TAlignment
- isEnzymeHidden()
: TVector
- isEnzymeVisible()
: PlasmidCanvas
- isEqual()
: TEnzymeRules
- isHidden()
: TRestrictionCut
- isHorizontal()
: SequenceCanvas
- isIdentity
: TAlignLine
- IsIUpacBase()
: TPrimer
- isLeaf()
: TPTree
- isLinear
: TVector, TClone
- isLocalDB()
: TStorage
- isLocked()
: MyFrame
- isMiniDisplay()
: SequenceCanvas
- isMySQL
: TStorage
- isoconv
: MyApp
- IsOK()
: TPhylip
- isotopes
: element, ipc_compound
- isPalindromic()
: TRestrictionEnzyme
- isPrinting()
: SequenceCanvas
- isProject
: TManageDatabaseDialog
- isseqchar
: ReadSeqVars
- IsSetupComplete()
: TGraphDisplay
- isSqlite3
: TStorage
- isThreadRunning()
: TAlignment
- isValidSequence()
: TGenBank
- isVisible()
: TVectorItem
- IsWhiteSpace()
: TiXmlBase
- IsWhiteSpaceCondensed()
: TiXmlBase
- italics
: SequenceCharMarkup, AlignmentAppearanceDialog
- item
: TSQLresult, TDDR
- itemAdd()
: TVectorEditor
- itemAsNewAA()
: PlasmidCanvas
- itemAsNewSequence()
: TVectorTree, PlasmidCanvas
- itemBlastAA()
: PlasmidCanvas
- itemBlastDNA()
: PlasmidCanvas
- itemChoice()
: TVectorEditor
- itemClr()
: TVectorEditor
- itemCol()
: TVectorEditor
- itemCol2()
: TVectorEditor
- itemColInternal()
: TVectorEditor
- itemCopyAA()
: PlasmidCanvas
- itemCopyDNA()
: TVectorTree, PlasmidCanvas
- itemDel()
: TVectorEditor
- itemDelete()
: TVectorTree, PlasmidCanvas
- itemEdit()
: TVectorTree, PlasmidCanvas
- itemMark()
: TVectorTree, PlasmidCanvas
- itemMarkShow()
: TVectorTree, PlasmidCanvas
- itemOverlap()
: CGview
- items
: TVectorEditor, TVector, TIMGreader
- itemSearch()
: FindSequenceDialog
- itemShowHide()
: TVectorTree, PlasmidCanvas
- itemsperline
: SeqBasic
- itemsShown
: CGview
- IterateChildren()
: TiXmlNode
- iterateFragments()
: TRestrictionEditor
- iterateItem()
: TGenBank
- ito
: TVectorEditor
- itrim()
: TGenBank
- IUPAC
: TVector
- IUpairVals_max
: TPrimer
- IUpairVals_min
: TPrimer
- l
: TMarkMem, SeqPos
- l3
: TPrimerDialog
- l5
: TPrimerDialog
- l_bottom
: SeqPlot
- l_sources
: TLigationDialog
- l_targets
: TLigationDialog
- l_text
: PCR_troubleshoot_dialog
- l_title
: PCR_troubleshoot_dialog
- l_top
: SeqPlot
- lanes
: TVirtualGel
- lang_string
: MyFrame
- language
: ProgramOptionsDialog
- Last()
: TiXmlAttributeSet
- last
: FindSequenceDialog, range
- last_al
: SequenceCanvas
- last_data
: TGraphDialog
- last_dragged_point
: TCloningAssistantPanel
- last_enzyme_selected
: TRestrictionEditor
- last_enzyme_selected_coc
: TRestrictionEditor
- last_font_size
: SequenceCanvas
- last_inner
: TGraphScale
- last_rightclick_base
: PlasmidCanvas
- last_scale
: TGraphDialog
- last_selection
: TSilmutDialog
- LastAttribute()
: TiXmlElement
- lastbp
: PlasmidCanvas
- LastChild()
: TiXmlNode
- lastChild
: TMainTree, TiXmlNode, MyFrame
- lastclick
: SequenceCanvas
- lastCocktail
: MyFrame
- lastLBsel
: TAminoAcids
- lastline
: AlignmentAppearanceDialog
- lastmarked
: SequenceCanvas
- lastpos
: SequenceCanvas
- lastPrimerActivated
: TPrimerDesign
- lastrect
: TRestrictionCut
- lastrestrictionsite
: PlasmidCanvas
- lastsel
: panel_data
- lastSelection
: TVectorEditor
- lastToolTip
: SequenceCanvas
- lasttooltip
: PlasmidCanvas
- lastVector
: TVectorItem
- lastvectorobject
: PlasmidCanvas
- lastwhere
: SequenceCanvas
- lastyoffset
: SequenceCanvas
- lb
: TSilmutDialog, TItemEditDialog, TImageDisplay, FindSequenceDialog, TAminoAcids
- lb_data
: TGraphDialog
- lb_retro
: TSilmutDialog
- lb_scales
: TGraphDialog
- lc
: TPrimerDialog, TPrimerDesign
- leaf
: node
- leafNumber
: TPTree
- left
: TGraphScale, TProteaseCut, node
- len()
: TProtease
- length
: TFragment
- lh
: ProgramOptionsDialog
- ligate_right()
: TVector
- ligates
: TLigationDialog
- ligDNA
: TCalculator
- ligGrid
: TCalculator
- lim_max
: TSilmutDialog
- lim_xhg
: TSilmutDialog
- limit
: TIPCDialog
- line_color_buttons
: AlignmentAppearanceDialog
- linear_e1
: TClone
- linear_e2
: TClone
- linear_s1
: TClone
- linear_s2
: TClone
- linearUpdate()
: TRestrictionCut
- lineheight
: panel_data
- lines
: SeqPlot, panel_data, TAlignment
- linestart
: ReadSeqVars
- LinkEndChild()
: TiXmlNode
- list
: PCR_troubleshoot_dialog
- listCE
: TVectorEditor
- listEnzymesInGroup()
: TRestrictionEditor
- listFragments()
: TRestrictionEditor
- listGE
: TVectorEditor
- listGroups
: TVectorEditor
- ll
: TVectorEditor
- llimit
: SeriesMat
- lmax
: TPrimerDialog
- lmin
: TPrimerDialog
- load()
: TXMLfile, TPDB, TClone, TGenBank, TCloneManager
- load_global_settings()
: TEnzymeRules
- loadEnzymeList()
: TClone
- LoadFile()
: TiXmlDocument
- loadItemData()
: TVectorEditor
- loadLastProject
: ProgramOptionsDialog, MyFrame
- location
: TiXmlBase, TRestrictionEnzyme
- lockDisplay()
: MyFrame
- locked
: MyFrame
- lockoffset
: panel_data
- logout
: MyApp
- logsize()
: SeqAA, SeqBasic
- lookup_options()
: TEnzymeRules
- lowx
: SequenceCanvas
- lowy
: SequenceCanvas
- lp
: TRestrictionCut
- lr
: TGraphDisplay
- LS
: TClone, MyFrame
- ls
: TProteolysis
- lu
: TVectorEditor
- ly
: MyChild
- m
: SeqPos, hept_pref
- m_bottomWindow
: MyFrame
- m_cc
: fit_dat
- m_checker
: MyApp
- m_g
: fit_dat
- m_leftWindow1
: MyFrame
- m_leftWindow2
: MyFrame
- m_topWindow
: MyFrame
- M_W
: SeqPlot
- machete()
: AutoAnnotate
- mainToolBar
: MyFrame
- mainTree
: MyFrame
- make_gnuplot_output()
: GPOUT
- makeAA2DNA()
: TVector
- makeEndnumberLength()
: SeqAlign, SeqDNA, SeqBasic
- makeGCcolor()
: PlasmidCanvas, CGview
- makeImage()
: TIMGreader
- makeInsert()
: TStorage
- makeItemsList()
: TVectorEditor
- makeLastRect()
: PlasmidCanvas
- makeLevels()
: SequencePartList
- makeStats()
: TPrimer
- mark
: SequenceCanvas, SeqPos, TGraphScale
- mark_firstrow
: SequenceCanvas
- mark_from
: SeqPos
- mark_lastrow
: SequenceCanvas
- mark_to
: SeqPos
- mark_value
: SeqPos
- markedFrom()
: SequenceCanvas
- markedTo()
: SequenceCanvas
- markEnzymeForDeletion()
: TStorage
- marking
: SequenceCanvas
- markup
: TAlignLine
- mass
: isotope
- mat
: UserMatSeries
- match
: TProtease, TAlignment
- matchchar
: prettyopts, ReadSeqVars
- MatchItem()
: AutoAnnotate
- matchToVector()
: TSequencingPrimerDialog
- matptr
: SeriesMat
- matrix
: TAlignment
- MatrixAlignment()
: TAlignment
- MatrixBacktrack()
: TAlignment
- max
: TGraphScale, TDDR_Timer
- max_cutoff
: TEnzymeRules
- max_dep
: TProteolysis
- MAX_DIGITS
: TIPC_PARS
- MAX_ENTITY_LENGTH
: TiXmlBase
- MAX_PEP_LINE
: TIPC_PARS
- maxband
: TVirtualGel
- maxCutoff
: TEnzymeSettingsTab
- maxendnumberlength
: SequenceCanvas
- Maximize()
: ChildBase
- maxlayers
: SeqFeature
- maxlevels
: SequencePartList
- maxseq
: ReadSeqVars
- maxx
: SeqABI
- me
: TMyDropTarget
- mem
: TUndo
- menu_bar
: MyFrame
- menubar
: ChildBase
- mergeCodons()
: TVector
- message
: TTreeItem, TLigationDialog
- met_dam
: TEnzymeSettingsTab
- met_dcm
: TEnzymeSettingsTab
- methyl
: TVector
- methylation
: TEnzymeRules
- methylationSites()
: TVector
- min
: TGraphScale
- min_cutoff
: TEnzymeRules
- MIN_DIF
: TIPC
- MIN_INT
: TIPC
- minCutoff
: TEnzymeSettingsTab
- miniDisplay
: SequenceCanvas
- miniDisplayOptions
: TAminoAcids
- minx
: SeqABI
- misc
: TMainTree
- mismatch
: TAlignment
- mix()
: TPhylip
- mmb
: TAlignment
- mode
: TSilmutDialog, TPhyloTree, SeqAA, TEnzymeSettingsTab, EIpanel, menu_item
- modified
: spanel
- mono
: TAlignment
- mouse_pos
: TGraphDisplay
- mousediffx
: PlasmidCanvas
- mousediffy
: PlasmidCanvas
- move()
: TPhylip
- move_back
: TDDR_Timer
- moveDNA()
: TManageDatabaseDialog
- MoveUpDown()
: TAlignment
- msg
: TUndo
- mtm
: MyApp
- multitrim()
: TGenBank
- mut
: TSilmutDialog, TSilmutItem, TPrimerDesign
- mut_dir
: TSilmutDialog
- mut_pos
: TSilmutDialog
- mw
: TAAProp
- MyChild
: MyChild, TVectorItem
- myDelete()
: TAlignment
- myExternal()
: myExternal
- MyFrame
: MyFrame, TVectorItem, TGenBank, ChildBase, TABIviewer
- MyGetClientSize()
: SequenceCanvas
- MyGetSize()
: SequenceCanvas
- MyGetViewStart()
: SequenceCanvas
- myInsert()
: TAlignment
- myname
: SeqAlign, SeqPrimer
- myRect()
: SeqPlot
- MySplitter()
: MySplitter
- mysql
: TStorage
- n
: hept_pref
- Name()
: TiXmlAttribute
- name
: TGelLane, TVectorEditor, TVector, TVectorItem, TProteolysisSuggestion, TPrimer, TPTree, TiXmlAttribute, TGraphScale, TGraphData, TextImportDialog, TClone, TClone_Enzyme, TProtease, TRestrictionEnzyme, TProject, TGenBankFeature, color, node, TAlignment, TAlignLine
- nameleft
: prettyopts
- nameright
: prettyopts
- names
: spanel
- nametop
: prettyopts
- namewidth
: prettyopts
- nb
: TVectorEditor, TGraph, TCalculator, TAlignmentDialog, ProgramOptionsDialog, TGraphDialog, TManageDatabaseDialog, ExternalInterface
- nb_data
: TGraphDialog
- nb_graph
: TGraphDialog
- nb_scales
: TGraphDialog
- nbytes
: TFLAG
- ncols
: panel_data
- NeedlemanWunsch()
: TAlignment
- neighbor()
: TPhylip
- NeighbourTM()
: TPrimer
- new_from_vector()
: TCloningAssistant
- new_item
: TransformSequenceDialog
- newABI()
: MyFrame
- newAminoAcids()
: MyFrame
- newCLONE()
: MyFrame
- newEnzyme()
: TVectorEditor
- newFromMark()
: TVector
- newFromVector()
: MyFrame
- newGB()
: MyFrame
- newitems
: TVectorEditor
- newPDB()
: MyFrame
- newPhyloTree()
: MyFrame
- newProtease()
: TVectorEditor
- newXML()
: MyFrame
- Next()
: TiXmlAttribute
- next
: TiXmlAttribute, TiXmlNode, spec_points, element, ipc_compound, isotope
- NextSibling()
: TiXmlNode
- NextSiblingElement()
: TiXmlNode
- nfoot
: panel_data
- nfst
: TRestrictionEditor
- nfstv
: TRestrictionEditor
- nhead
: panel_data
- nitrogen
: TAAProp
- nl
: PCR_troubleshoot_dialog
- nmat
: UserMatSeries
- NoChildren()
: TiXmlNode
- nocut
: TRestrictionEditor
- Node()
: TiXmlHandle
- node
: TiXmlHandle
- NodeType
: TiXmlNode
- noleaves
: prettyopts
- nonstandard_translation_table
: ProgramOptionsDialog, MyFrame
- noptions
: MatMenu
- note
: TProtease, TRestrictionEnzyme
- Notify()
: TDDR_Timer
- nrecords
: TFLAG
- nseq
: ReadSeqVars
- nseqs
: panel_data
- num
: menu_item
- num2html()
: EIpanel
- NUM_ENTITY
: TiXmlBase
- numberLeafs()
: TPTree
- numberoffragments
: TRestrictionEditor
- NumberOfLines()
: SequenceCanvas
- numbot
: prettyopts
- numleft
: prettyopts
- numline
: prettyopts
- numright
: prettyopts
- numseqs
: TUReadSeq
- numtop
: prettyopts
- numwidth
: prettyopts
- off
: TIMGitem
- offset
: TItemEditDialog, SeqBasic
- offset_items
: SeqAA
- offsets
: SeqAA
- ok
: TSequencingAssistantDialog
- old_data
: TGraphDisplay
- old_scale
: TGraphDisplay
- oldEnzymeRules
: TVectorEditor
- oldh
: TABIviewer
- OligoCount()
: TPrimer
- OnAA_all()
: TPrimerDesign, MyChild
- OnAA_known()
: TPrimerDesign, MyChild
- OnAA_none()
: MyChild
- OnAA_one()
: TPrimerDesign, MyChild
- OnAA_setit()
: TPrimerDesign, MyChild
- OnAA_three()
: TPrimerDesign, MyChild
- OnAA_three_1()
: TPrimerDesign, MyChild
- OnAA_three_2()
: TPrimerDesign, MyChild
- OnAA_three_3()
: TPrimerDesign, MyChild
- OnAA_three_M1()
: TPrimerDesign, MyChild
- OnAA_three_M2()
: TPrimerDesign, MyChild
- OnAA_three_M3()
: TPrimerDesign, MyChild
- OnAACol()
: ProgramOptionsDialog
- OnABIViewOnly()
: SequenceCanvas
- OnAbout()
: MyFrame
- OnACR()
: TSilmutDialog
- OnActivate()
: MyChild
- OnActivatePrimer()
: TPrimerDialog, TPrimerDesign
- OnActivation()
: TVectorTree
- OnAdd()
: TAlignmentDialog
- onAddAll()
: TRestrictionEditor
- OnAddHighlights()
: FindSequenceDialog
- OnAlignment()
: MyFrame
- OnAll()
: TProteolysis
- OnAppearance()
: SequenceCanvas
- OnAsNewFeature()
: MyChild, TAminoAcids
- OnAutoAnnotate()
: MyChild
- OnB1()
: EIpanel
- OnB2()
: EIpanel
- OnB3()
: EIpanel
- OnBackgroundButton()
: AlignmentAppearanceDialog
- OnBacktranslate()
: SequenceCanvas, TAminoAcids
- OnBlast()
: EIpanel
- OnBlastAA()
: TAminoAcids
- OnBnext()
: EIpanel
- OnButton1()
: TEnzymeSettingsTab
- OnButton2()
: TEnzymeSettingsTab
- OnButton3()
: TEnzymeSettingsTab
- OnButtonData()
: TGraphDialog
- OnButtonScales()
: TGraphDialog
- OnC1()
: EIpanel
- OnCalculator()
: MyFrame
- OnCancel()
: TVectorEditor, TSilmutDialog, TProteolysis, TPrimerDialog, TLigationDialog, TItemEditDialog, TextImportDialog, TAlignmentDialog, ProgramOptionsDialog, PCR_troubleshoot_dialog, TManageDatabaseDialog, FindSequenceDialog, AlignmentAppearanceDialog
- onCancel()
: TRestrictionEditor
- OnCB()
: TImageDisplay
- OnCBinvert()
: TImageDisplay
- OnCellChanged()
: TGridBasic
- OnChanged()
: MySplitter
- OnCharHook()
: TVectorEditor, TSilmutDialog, TSequencingAssistantDialog, TRestrictionEditor, TProteolysis, TPrimerDialog, TLigationDialog, TItemEditDialog, TGraph, TGraphDisplay, TextImportDialog, TAlignmentDialog, SequenceCanvas, ProgramOptionsDialog, PCR_troubleshoot_dialog, TransformSequenceDialog, TSequencingPrimerDialog, TEnzymeDialog, TSpeakDialog, TManageDatabaseDialog, FindSequenceDialog, CGdialog, TAutoAnnotateDialog, AlignmentAppearanceDialog
- OnCheckOK()
: TSequencingAssistantDialog
- OnChoose()
: TSilmutDialog
- OnChooseBackgroundColor()
: CGdialog
- OnChooseJar()
: CGdialog
- OnCircularLinear()
: MyChild
- OnCloningAssistant()
: MyFrame
- OnClose()
: MyFrame, ChildBase
- OnCloseChild()
: TMainTree
- OnColor()
: TItemEditDialog
- OnCopy()
: TMyGelControl, TPhyloTreeBox, TPhyloTree, TMyImagePanel, TImageDisplay, TGraph, SequenceCanvas, TPrimerDesign, MyChild, TAminoAcids, TAlignment, TABIviewer
- OnCopyAsImage()
: TGraphDisplay
- OnCopyImage()
: SequenceCanvas, PlasmidCanvas
- OnCopyResultAA()
: SequenceCanvas
- OnCopyResultDNA()
: SequenceCanvas
- OnCopyText()
: SequenceCanvas
- OnCopyToNew()
: MyChild, TABIviewer
- OnCut()
: SequenceCanvas, MyChild, TAminoAcids
- OnCuts()
: TProteolysis
- OnDataList()
: TGraphDialog
- OnDB()
: TSequencingPrimerDialog
- OnDel()
: TAlignmentDialog
- OnDeleteGap()
: SequenceCanvas
- OnDeleteOtherGaps()
: SequenceCanvas
- OnDeletePrimer()
: TPrimerDesign
- OnDir()
: TImageDisplay
- OnDirectLines()
: TPhyloTree
- OnDown()
: TAlignmentDialog
- OnDraw()
: TMyGelControl, TProteolysisGel, TPhyloTreeBox, TMyImagePanel, SequenceCanvas, PlasmidCanvas, TCloningAssistant, TCloningAssistantPanel
- OnDrawCircular()
: PlasmidCanvas
- OnDrawLinear()
: PlasmidCanvas
- OnDropFiles()
: MyFrameDropTarget
- OnDropText()
: TMyDropTarget
- OnDummy()
: TMyGelControl, TPhyloTreeBox, TMyImagePanel, TGraph, TCalculator, TPrimerDesign, MyChild, ChildBase, TAminoAcids, TABIviewer
- one2three()
: TVector
- OnEditMode()
: TPrimerDesign, MyChild, TAminoAcids, TABIviewer
- OnEditName()
: TAminoAcids, TABIviewer
- OnEditORFs()
: MyChild
- OnEditPrimer()
: TPrimerDesign
- oneLaneEach
: TRestrictionEditor
- OnEnzymeCheckbox()
: TEnzymeSettingsTab
- OnEnzymeEditor()
: MyFrame
- OnEvent()
: TMyGelControl, TVectorTree, TPhyloTreeBox, TMainTree, TMyImagePanel, TGraphDisplay, SequenceCanvas, PlasmidCanvas, TCloningAssistantPanel
- OnExit()
: MyApp
- OnExport()
: ChildBase
- OnExportPrimer()
: TPrimerDesign
- OnExternalInterface()
: MyFrame
- OnExtractAA()
: MyChild
- OnFile()
: TImageDisplay
- OnFileImport()
: MyFrame
- OnFileOpen()
: MyFrame
- OnFileSave()
: TPhyloTree, MyChild, ChildBase, TAminoAcids, TAlignment, TABIviewer
- OnFillKlenow()
: PlasmidCanvas
- OnFind()
: TPrimerDesign, MyChild, TAminoAcids, TABIviewer
- OnFocus()
: SequenceCanvas, ChildBase
- OnFontsize()
: TPrimerDesign, MyChild, TAminoAcids, TAlignment, TABIviewer
- OnForegroundButton()
: AlignmentAppearanceDialog
- OnGetItem()
: EILB
- OnGraph()
: MyFrame
- OnHelp()
: MyFrame, MyChild
- OnHelplines()
: TABIviewer
- OnHomepage()
: MyFrame
- OnHorizontal()
: TPrimerDesign, TAminoAcids, TAlignment, TABIviewer
- OnIgnore()
: TProteolysis
- OnImageViewer()
: MyFrame
- OnImportPrimer()
: TPrimerDesign
- OnInit()
: MyApp
- OnInsertGap()
: SequenceCanvas
- OnInsertOtherGaps()
: SequenceCanvas
- OnInsertRestrictionSiteLeft()
: SequenceCanvas, TPrimerDesign
- OnInsertRestrictionSiteRight()
: SequenceCanvas, TPrimerDesign
- OnInvCompl()
: TABIviewer
- OnIP()
: TAminoAcids
- OnIPC()
: TAminoAcids
- OnKillFocus()
: SequenceCanvas
- OnLabel()
: TVirtualGel
- OnLB()
: FindSequenceDialog
- OnLBdclick()
: FindSequenceDialog
- OnLbDoubleClick()
: TSilmutDialog
- OnLboxDClick()
: EIpanel
- OnLigation()
: MyFrame
- OnLimit()
: TIPCDialog
- online_tools
: MyFrame
- OnLineColorButton()
: AlignmentAppearanceDialog
- OnlineTools()
: MyFrame
- OnList()
: TItemEditDialog, PCR_troubleshoot_dialog
- OnListBox()
: TAminoAcids
- OnManageDatabase()
: MyFrame
- OnMarkAll()
: MyChild, TAminoAcids, TAlignment, TABIviewer
- OnMarker()
: TVirtualGel
- OnMDIClose()
: MyFrame
- OnMenuBold()
: TAlignment
- OnMenuCons()
: TAlignment
- OnMenuFeat()
: TAlignment
- OnMenuIdent()
: TAlignment
- OnMenuInvs()
: TAlignment
- OnMenuMono()
: TAlignment
- OnMenuNorm()
: TAlignment
- OnMenuRNA()
: TAlignment
- OnMenuSeq()
: TAlignment
- OnMenuSiml()
: TAlignment
- OnMenuSoa()
: TAlignment
- OnMenuSoaI()
: TAlignment
- OnNewFromResultAA()
: SequenceCanvas
- OnNewFromResultDNA()
: SequenceCanvas
- OnNone()
: TProteolysis
- OnNumProts()
: TProteolysis
- OnOK()
: TVectorEditor, TSilmutDialog, TProteolysis, TPrimerDialog, TLigationDialog, TItemEditDialog, TextImportDialog, TAlignmentDialog, ProgramOptionsDialog, PCR_troubleshoot_dialog, TEnzymeDialog, TMyMultipleChoiceDialog, TGraphDialog, TManageDatabaseDialog, AlignmentAppearanceDialog
- onOK()
: TRestrictionEditor
- OnOpenFeature()
: SequenceCanvas, PlasmidCanvas
- OnORFs()
: MyChild
- OnPaint()
: TMyGelControl, TPhyloTreeBox, TMyImagePanel, TGraphDisplay, PlasmidCanvas, TCloningAssistant, TCloningAssistantPanel
- OnPaste()
: SequenceCanvas, TPrimerDesign, MyChild, ChildBase, TAminoAcids
- OnPercent()
: TVirtualGel
- OnPhotometer()
: TAminoAcids
- OnPhylip()
: SequenceCanvas
- OnPlay()
: TSpeakDialog
- OnPrimerBackward()
: TVectorTree, SequenceCanvas, PlasmidCanvas
- OnPrimerBoth()
: TVectorTree, SequenceCanvas, PlasmidCanvas
- OnPrimerForward()
: TVectorTree, SequenceCanvas, PlasmidCanvas
- OnPrimerMutation()
: TVectorTree, SequenceCanvas, PlasmidCanvas
- OnPrint()
: TMyGelControl, TVirtualGel, TPhyloTreeBox, TPhyloTree, TMyImagePanel, TImageDisplay, SequenceCanvas, TPrimerDesign, TAminoAcids
- OnPrintImage()
: MyChild
- OnPrintPreview()
: TCalculator
- OnPrintReport()
: MyChild
- OnPrintRestrictionList()
: MyChild
- OnProgramOptions()
: MyFrame
- OnProjectClose()
: MyFrame
- OnProjectLoad()
: MyFrame
- OnProjectSave()
: MyFrame
- OnProtease()
: TProteolysis
- OnProteolysis()
: TAminoAcids
- OnQuit()
: MyFrame, MyChild
- OnRemoveSequencingPrimers()
: MyChild
- OnReset()
: TPrimerDialog, AlignmentAppearanceDialog
- OnResetHighlights()
: FindSequenceDialog
- OnRestriction()
: MyChild
- OnRightClick()
: TVectorTree, TMainTree
- OnRunCGviewer()
: CGdialog
- OnRunPCR()
: PlasmidCanvas, MyChild
- OnSashDrag()
: MyFrame
- OnSave()
: TImageDisplay, TGraph
- OnSaveAsBitmap()
: TMyGelControl, TPhyloTreeBox, TMyImagePanel
- OnSaveAsImage()
: TGraphDisplay
- OnSaveImage()
: SequenceCanvas, PlasmidCanvas
- OnScalesList()
: TGraphDialog
- OnSearch()
: TPrimerDialog, FindSequenceDialog
- OnSelAsNewPrimer()
: SequenceCanvas
- OnSelectCell()
: TGridData, TGridProtein, TGridDNA, TGridLigation
- OnSelectPrimer()
: TPrimerDesign
- OnSepFragments()
: TProteolysis
- OnSepResults()
: TProteolysis
- OnSeqBottom()
: SequenceCanvas
- OnSeqDown()
: SequenceCanvas
- OnSeqPrint()
: TCalculator, MyChild, TAlignment, TABIviewer
- OnSeqTop()
: SequenceCanvas
- OnSequencingAssistant()
: MyFrame
- OnSequencingPrimer()
: MyChild
- OnSeqUp()
: SequenceCanvas
- OnSetHighlightColor()
: FindSequenceDialog
- OnSettings()
: TAlignment
- OnShowGel()
: TProteolysis
- OnSilmut()
: SequenceCanvas, TPrimerDesign
- OnSiRNA()
: MyChild
- OnSize()
: TMyImagePanel, SequenceCanvas, MyFrame, TCloningAssistantPanel
- OnSortResults()
: TProteolysis
- OnSpeak()
: MyChild, TAminoAcids, TABIviewer
- OnSpin()
: TSilmutDialog, TPrimerDesign
- OnSpin2()
: TSilmutDialog
- OnSpinChanged()
: TPrimerDialog
- OnSpinHeight()
: TABIviewer
- OnSpinText()
: TPrimerDesign
- OnSpinWidth()
: TABIviewer
- OnStop()
: TSpeakDialog
- OnStrandCopy35()
: SequenceCanvas, PlasmidCanvas
- OnStrandCopy53()
: SequenceCanvas, PlasmidCanvas
- OnStrandCopyBoth()
: SequenceCanvas, PlasmidCanvas
- OnStrandNew35()
: SequenceCanvas, PlasmidCanvas
- OnStrandNew53()
: SequenceCanvas, PlasmidCanvas
- OnStrandNewBoth()
: SequenceCanvas, PlasmidCanvas
- OnSwapSides()
: TGraphDisplay
- OnTextChange()
: FindSequenceDialog
- OnTextImport()
: MyFrame
- OnToggleFeat()
: SequenceCanvas
- OnToggleFeatures()
: TPrimerDesign, MyChild
- OnToggleIDNA()
: MyChild
- OnToggleRestriction()
: MyChild
- OnToggleSources()
: TLigationDialog
- OnTransformSequence()
: MyChild
- OnTreeList()
: TPhyloTree
- OnTroubleshoot()
: TPrimerDesign
- OnTurningPoint()
: PlasmidCanvas
- OnUp()
: TAlignmentDialog
- OnUpdateRefresh()
: MyChild
- OnURL()
: TURLtext
- OnUseOffset()
: TItemEditDialog
- OnViewCondensed()
: SequenceCanvas
- OnViewMode()
: MyChild
- OnViewOriginal()
: SequenceCanvas
- OnViewReal()
: SequenceCanvas
- OnWhatCuts()
: SequenceCanvas, PlasmidCanvas
- OnZoom()
: MyChild, TABIviewer
- OnZoomX()
: TGraph
- OnZoomY()
: TGraph
- open_file()
: TIPC_ELEMENT
- operator<()
: TiXmlAttribute, TClone_Enzyme
- operator<<
: TiXmlNode
- operator=()
: TUndo, TiXmlHandle, TiXmlDocument, TiXmlUnknown, TiXmlDeclaration, TiXmlText, TiXmlComment, TiXmlElement, TiXmlAttribute, TiXmlNode, TiXmlBase
- operator==()
: TiXmlAttribute, TClone_Enzyme
- operator>()
: TiXmlAttribute
- operator[]()
: TSQLresult
- opp()
: PCR_troubleshoot_dialog
- opt
: MatMenu
- optimizeCircularRestrictionSites()
: PlasmidCanvas
- optimizeDatabase()
: TStorage
- optionsSizer
: TEnzymeSettingsTab
- order
: node
- orf_mode
: MyChild
- orfAsNewAA()
: PlasmidCanvas
- orfAsNewDNA()
: PlasmidCanvas
- orfAsNewItem()
: PlasmidCanvas
- orfBlastAA()
: PlasmidCanvas
- orfBlastDNA()
: PlasmidCanvas
- orfCopyAA()
: PlasmidCanvas
- orfCopyDNA()
: PlasmidCanvas
- orientation
: TLigationDialog
- orig
: TIMGitem
- original
: TDDR
- outline
: TGraphScale
- output
: TIMGreader
- overlap
: TPrimer, TRestrictionEnzyme
- oxygen
: TAAProp
- p
: TVectorTree, TTreeItem, TPrimerDialog, SequenceCanvas, SeqPos, TRestrictionCut, PlasmidCanvas, TMySQLDialog, isotope, FindSequenceDialog, blastThread, CGdialog, AutoAnnotate
- p1
: TIMGitem
- p2
: TIMGitem
- P_I
: SeqPlot
- pa_w
: SeqAA
- pa_wa
: SeqAA
- painting
: PlasmidCanvas
- palindromic
: TRestrictionEnzyme
- panel
: TCloningAssistant
- panEnzym
: TVectorEditor
- panEnzyme2
: TVectorEditor
- panItem
: TVectorEditor
- panProp
: TVectorEditor
- panProt
: TVectorEditor
- paramk
: TVector
- params
: TGenBank
- paramv
: TVector
- Parent()
: TiXmlNode
- parent
: TProteolysis, TPTree, TiXmlNode, PCR_troubleshoot_dialog, TGraphDialog, node, TDDR
- pars
: TPhylip, TIPC
- pars_amino_acid()
: TIPC_PARS
- pars_chem_form()
: TIPC_PARS
- pars_peptid()
: TIPC_PARS
- Parse()
: TiXmlDocument, TiXmlUnknown, TiXmlDeclaration, TiXmlText, TiXmlComment, TiXmlElement, TiXmlAttribute, TiXmlBase
- parse()
: TXMLfile, ABItype
- parseLines()
: TClone, TGenBank
- parseQblast()
: blastThread
- partialDigestion
: TRestrictionEditor
- paste()
: TPDB, TGenBank
- pattern3
: TEnzymeRules, TEnzymeSettingsTab
- pattern5
: TEnzymeRules, TEnzymeSettingsTab
- pattern_blunt
: TEnzymeRules, TEnzymeSettingsTab
- pause
: TSpeakDialog
- pb
: color
- pc
: TProteolysis, SeqAA, TAminoAcids
- pc_cache
: TProteolysis
- pCopynMove
: TManageDatabaseDialog
- PCR_troubleshoot_dialog()
: PCR_troubleshoot_dialog
- pd
: TSilmutDialog, TPrimerDialog, myExternal
- pd_db
: TManageDatabaseDialog
- pd_db_file
: TManageDatabaseDialog
- pd_db_name
: TManageDatabaseDialog
- pd_loadList()
: TManageDatabaseDialog
- pDatabases
: TManageDatabaseDialog
- pdisp
: TAlignmentDialog
- pdOnAdd()
: TManageDatabaseDialog
- pdOnDBchange()
: TManageDatabaseDialog
- pdOnDel()
: TManageDatabaseDialog
- pdOnNew()
: TManageDatabaseDialog
- pdOnSetDefault()
: TManageDatabaseDialog
- peaks
: TIPC
- pen
: TDDR
- pen_C
: SeqAAstructure
- pen_N
: SeqAAstructure
- pen_O
: SeqAAstructure
- pen_S
: SeqAAstructure
- penny()
: TPhylip
- pens
: SeqFeature
- percent
: TVirtualGel
- perm
: TGenBank
- pg
: color
- pgc
: TPrimer
- phow
: TAlignmentDialog
- phylip_dir
: TPhylip
- phylip_id
: TAlignLine
- pi
: TAAProp
- pixelheight
: panel_data
- pixelwidth
: panel_data
- pl
: TPrimerDialog, SeqFeature, SeqRestriction
- PlasmidCanvas
: PlasmidCanvas, TVectorItem
- plotr
: SeqPlot
- pm_dd_l
: TManageDatabaseDialog
- pm_dd_r
: TManageDatabaseDialog
- pm_dd_save
: TManageDatabaseDialog
- pm_init_lists()
: TManageDatabaseDialog
- pm_left
: TManageDatabaseDialog
- pm_list_items()
: TManageDatabaseDialog
- pm_name
: TManageDatabaseDialog
- pm_right
: TManageDatabaseDialog
- pmAddSQL()
: TManageDatabaseDialog
- pmGetContext()
: TManageDatabaseDialog
- pmNewSQL()
: TManageDatabaseDialog
- pmOnActivate()
: TManageDatabaseDialog
- pmOnActivateLeft()
: TManageDatabaseDialog
- pmOnActivateRight()
: TManageDatabaseDialog
- pmOnDelete()
: TManageDatabaseDialog
- pmOnFilter()
: TManageDatabaseDialog
- pmOnFilterAlignments()
: TManageDatabaseDialog
- pmOnFilterDesc()
: TManageDatabaseDialog
- pmOnFilterDNA()
: TManageDatabaseDialog
- pmOnFilterPrimer()
: TManageDatabaseDialog
- pmOnFilterProtein()
: TManageDatabaseDialog
- pmOnFilterSeq()
: TManageDatabaseDialog
- pmOnLeftChoice()
: TManageDatabaseDialog
- pmOnLeftListEvent()
: TManageDatabaseDialog
- pmOnListEvent()
: TManageDatabaseDialog
- pmOnOpen()
: TManageDatabaseDialog
- pmOnRename()
: TManageDatabaseDialog
- pmOnRightChoice()
: TManageDatabaseDialog
- pmOnRightClick()
: TManageDatabaseDialog
- pmOnRightClickLeft()
: TManageDatabaseDialog
- pmOnRightClickRight()
: TManageDatabaseDialog
- pmOnRightListEvent()
: TManageDatabaseDialog
- pmOnSave()
: TManageDatabaseDialog
- pmOnSelect()
: TManageDatabaseDialog
- pmOnSelectLeft()
: TManageDatabaseDialog
- pmOnSelectRight()
: TManageDatabaseDialog
- pmOnTwoPanes()
: TManageDatabaseDialog
- pmOpenFiles()
: TManageDatabaseDialog
- pname
: TVectorItem
- pointinrect()
: PlasmidCanvas
- pointStyle
: TGraphData
- pop()
: TUndo
- pop_help()
: MyFrame
- pos
: TGelLane, SeqBasic, TRestrictionCut, TFLAG
- position
: TClone_Enzyme
- postProcess()
: CGview
- pr
: TStorage, color
- pr_cache
: TProteolysis
- pR_showFragments()
: TRestrictionEditor
- pR_showGroupEnzymes()
: TRestrictionEditor
- pre
: TRestrictionEditor
- prealigned()
: TAlignment
- prepare()
: SequencePartList
- prepareFeatureEdit()
: TVector
- prettyColor
: TGraphDisplay
- prev
: TiXmlAttribute, TiXmlNode
- preventUpdate
: SequenceCanvas
- previous
: spec_points, element, ipc_compound, isotope
- Previous()
: TiXmlAttribute
- PreviousSibling()
: TiXmlNode
- prf_no
: panel_data
- primaryMode
: SeqAA
- primer
: TPrimerDesign
- primers
: TMainTree
- Print()
: TiXmlDocument, TiXmlUnknown, TiXmlDeclaration, TiXmlText, TiXmlComment, TiXmlElement, TiXmlAttribute, TiXmlBase
- print()
: TGridBasic, PlasmidCanvas
- print_dc
: SequenceCanvas
- print_maxx
: SequenceCanvas
- print_result()
: TIPC
- print_spectrum()
: GPOUT
- print_sum()
: TIPC_PARS
- printing
: TMyGelControl, TMyImagePanel, SequenceCanvas, PlasmidCanvas
- printToColor
: SequenceCanvas
- pro_txt
: TVectorEditor
- process()
: EIpanel
- process_blast()
: EIpanel
- process_blast2()
: EIpanel
- process_ncbi()
: EIpanel
- ProgramOptionsDialog()
: ProgramOptionsDialog
- programVersion
: MyApp
- project
: MyFrame
- proml()
: TPhylip
- promlk()
: TPhylip
- prop
: SeqPlot
- propBox
: MyChild
- prot
: TCalculator
- protdist()
: TPhylip
- protease
: TProteaseCut
- proteases
: TVector, TProteolysis, TProteolysisSuggestion, SeqAA
- proteaseSelChange()
: TVectorEditor
- protpars()
: TPhylip
- prots
: TVectorEditor
- ptr
: menu_item
- push_help()
: MyFrame
- push_rc_left()
: PlasmidCanvas
- push_rc_right()
: PlasmidCanvas
- PutString()
: TiXmlBase
- pvalue
: TVectorItem
- pwhat
: TAlignmentDialog
- r
: TImageDisplay, SeqPos, PlasmidCanvas, color, TDDR
- r1
: TVectorItem, TRestrictionCut
- r2
: TVectorItem, TRestrictionCut
- r3
: TVectorItem, TPrimerDialog, TRestrictionCut
- r4
: TVectorItem
- r5
: TPrimerDialog
- radioboxes
: AlignmentAppearanceDialog
- radius
: CGview
- RawMatch()
: AutoAnnotate
- rb
: TRestrictionEditor, TItemEditDialog
- rc
: TVector
- re
: TVector, TStorage
- re2
: TVector
- readFile()
: TIMGreader
- readGBintervals()
: TXMLfile
- readGBqualifiers()
: TXMLfile
- readGBSeq()
: TXMLfile
- ReadName()
: TiXmlBase
- readonly
: TEnzymeDialog
- readRawData()
: TGraphDisplay
- readTabColors()
: TAlignment
- ReadText()
: TiXmlBase
- readTextfile()
: TGraphDisplay
- ReadValue()
: TiXmlElement
- recalc()
: TProteolysis, TGridData, TGridProtein, TGridDNA, TGridLigation, TGridBasic
- recalc_rc()
: PlasmidCanvas
- recalcAlignments()
: TAlignment
- recalculateCuts()
: TVector
- recalcvisual
: TVector
- recog4
: TEnzymeRules, TEnzymeSettingsTab
- recog5
: TEnzymeRules, TEnzymeSettingsTab
- recog6
: TEnzymeRules, TEnzymeSettingsTab
- recog6p
: TEnzymeSettingsTab
- recog_longer
: TEnzymeRules
- record
: TStorage
- recording
: TStorage
- rect
: TPTree
- Redo()
: MyChild, TAminoAcids
- redoAlignments()
: TAlignment
- reduceToFragment()
: TVector
- Refresh()
: TMyImagePanel, PlasmidCanvas, TCloningAssistant, TCloningAssistantPanel
- refreshCocktail()
: TRestrictionEditor
- registerFileExtension()
: MyApp
- registerProtocol()
: MyApp
- remainder
: TFLAG
- remap()
: TPDB, TClone, TGenBank
- remark()
: TMarkMem
- remember()
: TUndo
- rememberLastProject()
: MyFrame
- remoteCocktail
: TRestrictionEditor
- Remove()
: TiXmlAttributeSet
- remove_ignored_cuts()
: TProteolysis
- removeAlignmentArtifacts()
: TVector
- RemoveAttribute()
: TiXmlElement
- removeBlanksFromSequence()
: TVector
- removeBlanksFromVector()
: TVector
- RemoveChild()
: TiXmlNode
- removeChild()
: TMainTree, MyFrame
- removeEnzymeFromGroup()
: TStorage
- removeEnzymeGroup()
: TStorage
- rep
: TPrimerDialog
- ReplaceChild()
: TiXmlNode
- replaceTable()
: TStorage
- report()
: TPrimer
- RerouteMenu()
: MyFrame
- res
: blastThread, aln_pos
- res_ac()
: TRestrictionEditor
- res_cb()
: TRestrictionEditor
- res_cb_add2gel()
: TRestrictionEditor
- res_checkbox()
: TRestrictionEditor
- res_coc_ll()
: TRestrictionEditor
- res_coc_rm()
: TRestrictionEditor
- res_count
: EIpanel
- res_ct()
: TRestrictionEditor
- res_dd()
: TRestrictionEditor
- res_ll()
: TRestrictionEditor
- res_ll_act()
: TRestrictionEditor
- res_ll_col()
: TRestrictionEditor
- res_start
: EIpanel
- reserve()
: SeqPos
- ResetSequence()
: TAlignLine
- resetTurn()
: TVector
- residue_exception
: panel_data
- resizeForText()
: TDDR
- restdist()
: TPhylip
- restml()
: TPhylip
- restrictionSearch()
: FindSequenceDialog
- results
: TStorage, TProteolysis
- RETMAX
: EIpanel
- retree()
: TPhylip
- rf
: TORF
- RGB2string()
: CGview
- RID
: blastThread
- right
: TVirtualGel, TImageDisplay, node
- rl
: TVectorEditor
- RootElement()
: TiXmlDocument
- Row()
: TiXmlBase
- row
: TiXmlCursor
- rows()
: TSQLresult
- rpv
: TStorage
- rsAdd2Cocktail()
: TVectorTree, PlasmidCanvas
- rsAddAndCut()
: TVectorTree, PlasmidCanvas
- rsCutWithCocktail()
: TVectorTree, PlasmidCanvas
- rsDel()
: TVectorTree, PlasmidCanvas
- rsEdit()
: TVectorTree, PlasmidCanvas
- rsHideLimit()
: SequenceCanvas, PlasmidCanvas
- rsInfo()
: TVectorTree, PlasmidCanvas
- rsl
: TRestrictionEditor
- rsl2
: TRestrictionEditor
- rsMark()
: TVectorTree, PlasmidCanvas
- rsMarkShow()
: TVectorTree, PlasmidCanvas
- rsShowHide()
: TVectorTree, PlasmidCanvas
- RTOE
: blastThread
- ru
: TVectorEditor
- Run()
: AutoAnnotate
- runAlignment()
: MyFrame
- runapp()
: TPhylip
- runBlast()
: ExternalInterface
- RunCalculator()
: MyFrame
- runcgview
: CGdialog
- runCGview
: CGview
- RunGraph()
: MyFrame
- runimageapp
: CGview, CGdialog
- running
: TSilmutDialog
- RunPhylip()
: TAlignment
- RunPrimerEditor()
: PlasmidCanvas
- runRestriction()
: MyChild
- runSettingsDialog()
: CGview
- S
: TPrimer
- s
: ReadSeqVars, TIMGitem, SeqBasic, TMySQLDialog, TAlignLine
- safeShow()
: SequenceCanvas
- santa_lucia
: PCR_troubleshoot_dialog
- save()
: TClone
- save_global_settings()
: TEnzymeRules
- save_settings()
: TGraphDialog
- SaveFile()
: TiXmlDocument
- saveImage()
: MyFrame
- sc
: TMarkMem, TPrimerDesign, fit_dat, TAminoAcids, TAlignment, TABIviewer
- sc2
: TAminoAcids
- scales
: TGraphDisplay, TGraphDialog
- scales_color
: TGraphDialog
- scales_max
: TGraphDialog
- scales_min
: TGraphDialog
- scales_name
: TGraphDialog
- scales_unit
: TGraphDialog
- scaleTypes
: TGraphDisplay
- scalex
: SeqABI
- scan()
: PCR_troubleshoot_dialog
- scan_color()
: TEnzymeRules
- scan_dimer()
: PCR_troubleshoot_dialog
- scan_end_stability()
: PCR_troubleshoot_dialog
- scan_GCclamp()
: PCR_troubleshoot_dialog
- scan_GCcontent()
: PCR_troubleshoot_dialog
- scan_hairpin()
: PCR_troubleshoot_dialog
- scan_item()
: TCloneManager
- scan_length()
: PCR_troubleshoot_dialog
- scan_melting_temperature()
: PCR_troubleshoot_dialog
- scan_Runs()
: PCR_troubleshoot_dialog
- scan_specificity()
: PCR_troubleshoot_dialog
- scanChouFasman()
: SeqPlot
- ScanDatabase()
: AutoAnnotate
- scanMinMax()
: SeqPlot
- scanNewick()
: TPTree
- score
: TsiRNA
- screenScale
: SeqABI
- sd_cc
: fit_dat
- sd_g
: fit_dat
- segment_exception
: panel_data
- SelChangeItems()
: TVectorEditor
- selected
: TGraphScale, TGraphData, panel_data
- selID()
: TSilmutDialog
- sentinel
: TiXmlAttributeSet
- sep_desc
: TProteolysis
- sep_fragments
: TProteolysis
- sep_num_prot
: TProteolysis
- sep_results
: TProteolysis
- separateNames()
: TClone
- seq
: TPDB, ReadSeqVars, TPrimerDialog, SequenceCanvas, TSantaLucia, TSpeakDialog, aln_pos
- seq_names
: TUReadSeq
- SeqAA()
: SeqAA
- SeqAAstructure()
: SeqAAstructure
- SeqABI()
: SeqABI
- SeqAlign()
: SeqAlign
- SeqBasic()
: SeqBasic
- SeqBlank()
: SeqBlank
- seqboot()
: TPhylip
- SeqDivider()
: SeqDivider
- SeqDNA()
: SeqDNA
- SeqFeature()
: SeqFeature
- seqid
: ReadSeqVars
- seqlen
: ReadSeqVars, TIPCDialog
- seqlencount
: ReadSeqVars
- SeqNum()
: SeqNum
- SeqPlot()
: SeqPlot
- SeqPos()
: SeqPos
- SeqPrimer()
: SeqPrimer
- seqres
: TPDB
- SeqRestriction()
: SeqRestriction
- seqs
: TUReadSeq, spanel
- sequence
: TVector, TSequencingAssistantDialog, TPrimer, tseqres, TextImportDialog, TClone, TRestrictionEnzyme, TOnlineTools, TSpeakDialog
- SequenceCanvas()
: SequenceCanvas
- SequenceCharMarkup()
: SequenceCharMarkup
- SequencePartList()
: SequencePartList
- sequences
: TMainTree
- sequenceSearch()
: FindSequenceDialog
- seqweight
: panel_data
- seqwidth
: prettyopts
- set()
: TORF
- Set()
: EILB
- set_atoms()
: TAAProp
- set_cf()
: TAAProp
- set_data()
: TAAProp
- set_font_size()
: SequenceCanvas
- set_halflife()
: TAAProp
- set_hp()
: TAAProp
- set_pen()
: AlignmentAppearanceDialog
- set_up
: TGraphDialog
- set_view()
: TABIviewer
- set_view_only()
: TABIviewer
- setAction()
: TVector
- setActiveChild()
: MyFrame
- SetAttribute()
: TiXmlElement
- setbase()
: TUndo
- setCCW()
: TClone_Gene
- setChanged()
: TVector
- setChild()
: MyFrame
- setCircular()
: TVector
- setCodonTable()
: TVector
- setColor()
: TVectorItem
- SetCondenseWhiteSpace()
: TiXmlBase
- setCut()
: TRestrictionEnzyme
- setDatabase()
: TVector
- setDescription()
: TVector
- setDirection()
: TVectorItem
- SetDocument()
: TiXmlAttribute
- SetDoubleAttribute()
: TiXmlElement
- SetDoubleValue()
: TiXmlAttribute
- setDrawAll()
: SequenceCanvas
- setDummyToolbar()
: MyFrame
- setEditMode()
: SequenceCanvas
- setEnzymeCache()
: TStorage
- setEnzymeRules()
: TVector, TProject
- SetError()
: TiXmlDocument
- setFromVector()
: TVector
- setFromXML()
: SequenceCharMarkup
- setGenomeMode()
: TVector
- setHorizontal()
: SequenceCanvas
- SetIcon()
: ChildBase
- SetIntValue()
: TiXmlAttribute
- setInvCompl()
: SeqABI
- setIUPAC()
: TVector
- setLastContextItem()
: PlasmidCanvas
- setLastVector()
: TVectorItem
- setLastWhere()
: SequenceCanvas
- setLines()
: SeqPlot
- setLowX()
: SequenceCanvas
- setMark()
: SeqAA, SeqDNA, SeqBasic, PlasmidCanvas
- setMarker()
: TGelLane
- SetMenuBar()
: ChildBase
- setMiniDisplay()
: SequenceCanvas
- setModeDrawgram()
: TPhyloTree
- setModeStrange()
: TPhyloTree
- SetMyMenuBar()
: ChildBase
- SetMyToolTip()
: PlasmidCanvas
- SetName()
: TiXmlAttribute
- setName()
: TVector, TPrimer, TPTree, TRestrictionEnzyme
- setNewickTree()
: TPhyloTree
- setNewickTrees()
: TPhyloTree
- setNucleotide()
: TVector
- setOffset()
: TVectorItem
- setOption()
: TStorage
- setOverlap()
: TRestrictionEnzyme
- setParam()
: TVector, TVectorItem
- setParams()
: TVector
- setPos()
: SeqAA, SeqDNA, SeqBasic, TRestrictionCut
- setPrinting()
: PlasmidCanvas
- setPrintToColor()
: SequenceCanvas
- setRealNames()
: TPhyloTree
- setRF()
: TVectorItem
- setRootChild()
: PlasmidCanvas
- SetScales()
: TGraphData
- setSequence()
: TVector, TRestrictionEnzyme
- setStickyEnd()
: TVector
- SetTabSize()
: TiXmlDocument
- SettingsDialog()
: AutoAnnotate
- setTreeID()
: TVectorItem
- setType()
: TVector, TVectorItem
- setup()
: AlignmentAppearanceDialog
- setup_options()
: TEnzymeRules
- setupBioCSVFormat()
: TGraphDisplay
- setupBioFormat()
: TGraphDisplay
- setupCompleted
: TGraphDisplay
- setupDUF()
: TGraphDisplay
- SetupDummy()
: TGraphDisplay
- setupFluorimeterGraph()
: TGraphDisplay
- SetupFromFile()
: TGraphDisplay
- setupIPCfile()
: TGraphDisplay
- setupPhotometerGraph()
: TGraphDisplay
- setupRawFPLC()
: TGraphDisplay
- setupXYpair()
: TGraphDisplay
- SetUserData()
: TiXmlBase
- SetValue()
: TiXmlAttribute, TiXmlNode
- setVisible()
: TVectorItem
- setWeight()
: TPTree
- setWindow()
: TVector
- setZoom()
: PlasmidCanvas
- SetZoom()
: TGraphDisplay
- shortname
: TClone_Gene
- show()
: SeqPlot, SeqFeature, SeqABI, SeqAAstructure, SeqAA, SeqRestriction, SeqAlign, SeqPrimer, SeqDNA, SeqBlank, SeqDivider, SeqNum, SeqBasic
- show_direct()
: SeqPlot, SeqFeature, SeqABI, SeqAA, SeqPrimer, SeqDNA, SeqBasic
- show_features
: TPrimerDesign
- show_fragment_list()
: TProteolysis
- show_gel()
: TProteolysis
- show_item()
: PCR_troubleshoot_dialog
- show_mark
: TGraphScale
- show_text
: TMyImagePanel
- show_uncut
: TProteolysis
- showChouFasman()
: SeqPlot
- showContextMenu()
: SequenceCanvas
- ShowCur()
: TPrimerDialog
- ShowData()
: TGraphDialog
- ShowDir()
: TImageDisplay
- showDraggingRect()
: TGraphDisplay
- showEnzymeGroups()
: TVectorEditor
- showEnzymePos
: ProgramOptionsDialog, MyFrame
- showFeatures()
: TAlignLine
- showgc
: TEnzymeRules, TEnzymeSettingsTab, CGview, CGdialog
- showGC()
: TVector
- showGClegend()
: PlasmidCanvas
- showGroupEnzymes()
: TVectorEditor
- showHelpLines
: SeqABI
- showHP()
: SeqPlot
- showIdentity
: TAlignment
- showit()
: TSilmutDialog
- ShowLC()
: TPrimerDialog
- showLegend()
: TGraphDisplay
- showMessage()
: EIpanel
- showMiniature()
: TGraphDisplay
- showMW()
: SeqPlot
- shown
: SeqBasic
- showName()
: ChildBase
- showNcoils()
: SeqPlot
- showNumbers
: SeqAA, SeqDNA
- showORFs
: MyChild
- showPI()
: SeqPlot
- showPlot()
: SeqPlot
- showProteases()
: TVectorEditor
- showrestrictionsites
: CGview, CGdialog
- ShowScale()
: TGraphDialog
- showSequence()
: TPrimerDesign, TAminoAcids, TABIviewer
- showSplashScreen
: ProgramOptionsDialog, MyFrame
- showStat()
: TAminoAcids, TABIviewer
- showStopCodon
: ProgramOptionsDialog, MyFrame
- showText()
: SeqAA, SeqDNA, SeqBasic
- showTips
: ProgramOptionsDialog
- showToolTips
: ProgramOptionsDialog, MyFrame
- showVectorLength
: MyFrame
- showVectorTitle
: MyFrame
- SilentRefresh()
: SequenceCanvas
- SIUPAC
: TVector
- size
: SequencePartList, TIMGreader, TClone
- skiplines
: TUReadSeq
- SkipWhiteSpace()
: TiXmlBase
- slash
: MyApp
- slen
: SequencePartList
- slider
: TABIviewer
- smallest
: hept_pref
- smallFont
: SequenceCanvas
- SmithWaterman()
: TAlignment
- sName
: TextImportDialog
- Sort()
: EILB
- sort_cuts()
: TProteolysis
- sortRestrictionSites()
: TVector
- sortresults
: TProteolysis
- sp
: ReadSeqVars
- sp1
: MyChild
- sp2
: MyChild
- spacer
: prettyopts
- spare
: TFLAG
- speakLetter()
: TSpeakDialog
- spin
: TPrimerDesign
- spinHeight()
: TABIviewer
- spinTextEnabeled
: TPrimerDesign
- sqlAdd()
: TStorage
- sSequence
: TextImportDialog
- st_msg
: EIpanel
- Stamp()
: TiXmlParsingData
- stamp
: TiXmlParsingData
- standalone
: TiXmlDeclaration
- Standalone()
: TiXmlDeclaration
- start
: TUndo, rangeNum
- startEdit()
: SequenceCanvas
- startOfLine
: SeqPlot
- startRecord()
: TStorage
- startup()
: TStorage
- stat
: TPrimerDesign, TAminoAcids, TABIviewer
- status
: FindSequenceDialog
- stop()
: TUndo
- stopcodon
: MyFrame
- stopEdit()
: SequenceCanvas
- storagetype
: TStorage
- storeItemData()
: TVectorEditor
- str
: TiXmlBase::Entity, cmd_line_data
- str_match
: TProtease
- strange_compensation_factor
: SeqABI
- StreamOut()
: TiXmlDocument, TiXmlUnknown, TiXmlDeclaration, TiXmlText, TiXmlComment, TiXmlElement, TiXmlAttribute, TiXmlBase
- string
: MatMenuEntry
- StringEqual()
: TiXmlBase
- StringToBuffer()
: TiXmlBase::StringToBuffer
- stripGroupName()
: TStorage
- strLength
: TiXmlBase::Entity
- styles
: TGraphDisplay
- subgroup
: panel_data
- subsearch()
: FindSequenceDialog
- success
: TXMLfile, TCloneManager, TPDB, TClone, TGenBank
- suggestions
: TProteolysis
- sulfur
: TAAProp
- summarize_peaks()
: TIPC
- SValue()
: TiXmlNode
- sw
: MyChild
- swl
: MyChild
- swu
: MyChild
- sx
: TGraphData
- sy
: TGraphData
- symbol
: element
- syncEnzymes()
: TStorage
- synchronize()
: TStorage
- t
: TXMLfile, TMarkMem, FindSequenceDialog
- t1
: EIpanel
- t2
: EIpanel
- t3
: EIpanel
- t4
: EIpanel
- t_ma
: TSequencingPrimerDialog
- TAAProp()
: TAAProp
- tab
: prettyopts
- TABIviewer()
: TABIviewer
- tableInfoSet()
: TStorage
- tabsize
: TiXmlParsingData, TiXmlDocument
- TabSize()
: TiXmlDocument
- taCount
: TPrimer
- take_event()
: TOnlineTools
- takesMouseActions
: SeqBasic
- TAlignLine()
: TAlignLine
- TAlignment
: TAlignment, TGenBank
- TAlignmentDialog()
: TAlignmentDialog
- TAminoAcids()
: TAminoAcids
- targetSize
: myExternal
- TAutoAnnotateDialog
: TAutoAnnotateDialog, AutoAnnotate
- tb_mychild
: MyFrame
- TCalculator()
: TCalculator
- TClone()
: TClone
- TClone_Enzyme()
: TClone_Enzyme
- TClone_Gene()
: TClone_Gene
- TCloneManager()
: TCloneManager
- TCloningAssistant()
: TCloningAssistant
- TCloningAssistantPanel
: TCloningAssistantPanel, TCloningAssistant
- TDDR()
: TDDR
- TDDR_Timer
: TCloningAssistantPanel
- Tdna2aa()
: Tdna2aa
- TEnzymeDialog()
: TEnzymeDialog
- TEnzymeRules()
: TEnzymeRules
- TEnzymeSettingsTab()
: TEnzymeSettingsTab
- TestMenu()
: MyFrame
- Text()
: TiXmlHandle
- TEXT
: TiXmlNode
- text
: PCR_troubleshoot_dialog
- textcolor
: SequenceCharMarkup
- TextImportDialog()
: TextImportDialog
- textWindow
: TVectorTree
- TFLAG()
: TFLAG
- TGelLane()
: TGelLane
- TGenBank()
: TGenBank
- TGenBankFeature()
: TGenBankFeature
- TGraph()
: TGraph
- TGraphData()
: TGraphData
- TGraphDialog()
: TGraphDialog
- TGraphDisplay
: TGraphDisplay, TGraph
- TGraphScale()
: TGraphScale
- TGridBasic()
: TGridBasic
- TGridData()
: TGridData
- TGridDNA()
: TGridDNA
- TGridLigation()
: TGridLigation
- TGridProtein()
: TGridProtein
- th
: TVectorEditor, TAlignmentDialog, TManageDatabaseDialog
- theRealLocalDb
: MyApp
- thetarget
: TManageDatabaseDialog
- thickness
: AlignmentAppearanceDialog
- ThickRedPen
: TDDR
- threadRunning
: TAlignment
- three2one()
: TVector
- TImageDisplay()
: TImageDisplay
- timer
: TCloningAssistantPanel
- TIMGreader()
: TIMGreader
- TIPC
: TIPC, TIPC_PARS, GPOUT, TIPC_ELEMENT
- TIPC_ELEMENT
: TIPC_ELEMENT, TIPC
- TIPC_PARS
: TIPC_PARS, TIPC, TIPC_ELEMENT
- TIPCDialog()
: TIPCDialog
- TItemEditDialog()
: TItemEditDialog
- title
: TGenBank, MatMenuEntry, TDDR
- TIXML_ERROR
: TiXmlBase
- TIXML_ERROR_DOCUMENT_EMPTY
: TiXmlBase
- TIXML_ERROR_EMBEDDED_NULL
: TiXmlBase
- TIXML_ERROR_FAILED_TO_READ_ELEMENT_NAME
: TiXmlBase
- TIXML_ERROR_OPENING_FILE
: TiXmlBase
- TIXML_ERROR_OUT_OF_MEMORY
: TiXmlBase
- TIXML_ERROR_PARSING_COMMENT
: TiXmlBase
- TIXML_ERROR_PARSING_DECLARATION
: TiXmlBase
- TIXML_ERROR_PARSING_ELEMENT
: TiXmlBase
- TIXML_ERROR_PARSING_EMPTY
: TiXmlBase
- TIXML_ERROR_PARSING_UNKNOWN
: TiXmlBase
- TIXML_ERROR_READING_ATTRIBUTES
: TiXmlBase
- TIXML_ERROR_READING_ELEMENT_VALUE
: TiXmlBase
- TIXML_ERROR_READING_END_TAG
: TiXmlBase
- TIXML_ERROR_STRING_COUNT
: TiXmlBase
- TIXML_NO_ERROR
: TiXmlBase
- TiXmlAttribute()
: TiXmlAttribute
- TiXmlAttributeSet
: TiXmlAttributeSet, TiXmlAttribute
- TiXmlBase()
: TiXmlBase
- TiXmlComment()
: TiXmlComment
- TiXmlCursor()
: TiXmlCursor
- TiXmlDeclaration()
: TiXmlDeclaration
- TiXmlDocument
: TiXmlDocument, TiXmlParsingData, TiXmlNode, TiXmlBase
- TiXmlElement
: TiXmlElement, TiXmlText, TiXmlNode, TiXmlBase
- TiXmlHandle()
: TiXmlHandle
- TiXmlNode
: TiXmlNode, TiXmlBase
- TiXmlParsingData()
: TiXmlParsingData
- TiXmlText()
: TiXmlText
- TiXmlUnknown()
: TiXmlUnknown
- tla
: TAAProp
- TLigationDialog()
: TLigationDialog
- tlist
: TCloningAssistant
- tm
: TPrimer
- tm_gc
: TPrimer
- tm_salt
: TPrimer
- TMainTree()
: TMainTree
- TMainTreeItem()
: TMainTreeItem
- TManageDatabaseDialog()
: TManageDatabaseDialog
- TMarkMem()
: TMarkMem
- tmax
: TPrimerDialog
- tmin
: TPrimerDialog
- TMyDropTarget()
: TMyDropTarget
- TMyGelControl()
: TMyGelControl
- TMyImagePanel()
: TMyImagePanel
- TMyMultipleChoiceDialog()
: TMyMultipleChoiceDialog
- TMySQLDialog()
: TMySQLDialog
- to
: TVectorItem, TORF, TSilmutDialog, TFragment, TPrimer, TsiRNA, AlignmentAppearanceDialog
- to_grey()
: MyFrame
- to_string()
: TEnzymeRules
- ToComment()
: TiXmlNode
- ToDeclaration()
: TiXmlNode
- ToDocument()
: TiXmlNode
- ToElement()
: TiXmlNode
- toggle_inv_compl()
: TABIviewer
- ToggleEnzymeVisibility()
: TVectorTree
- toggleHorizontal()
: SequenceCanvas
- ToLower()
: TiXmlBase
- TOnlineTools()
: TOnlineTools
- toolbar
: ChildBase
- top
: TGraphScale
- topnseq
: ReadSeqVars
- topseqlen
: ReadSeqVars
- TORF()
: TORF
- total_log_counter
: MyApp
- total_log_time
: MyApp
- ToText()
: TiXmlNode
- ToUnknown()
: TiXmlNode
- TPDB()
: TPDB
- TPhylip()
: TPhylip
- TPhyloTree()
: TPhyloTree
- TPhyloTreeBox
: TPhyloTreeBox, TPhyloTree
- TPrimer()
: TPrimer
- TPrimerDesign()
: TPrimerDesign
- TPrimerDialog()
: TPrimerDialog
- TProject()
: TProject
- TProtease()
: TProtease
- TProteolysis()
: TProteolysis
- TProteolysisGel()
: TProteolysisGel
- TPTree()
: TPTree
- transformSequence()
: TVector
- TransformSequenceDialog()
: TransformSequenceDialog
- translate()
: TVectorItem
- translation_tables
: ProgramOptionsDialog
- TREcache()
: TREcache
- tree
: TPhyloTree
- treeBox
: MyChild
- treedist()
: TPhylip
- treeid
: TVectorItem, TRestrictionCut
- treelist
: TPhyloTree
- treeroot
: TVectorTree, TMainTree
- trees
: TPhyloTree
- TRestrictionCut()
: TRestrictionCut
- TRestrictionEditor()
: TRestrictionEditor
- TRestrictionEnzyme()
: TRestrictionEnzyme
- trim()
: TGenBank
- trim_both()
: PCR_troubleshoot_dialog
- trimQuotes()
: TGenBank
- tryall()
: TGraphDisplay
- TSantaLucia()
: TSantaLucia
- TSequencingAssistantDialog()
: TSequencingAssistantDialog
- TSequencingPrimerDialog()
: TSequencingPrimerDialog
- TSilmutDialog()
: TSilmutDialog
- TsiRNA()
: TsiRNA
- TSpeakDialog()
: TSpeakDialog
- TSQLresult()
: TSQLresult
- TStorage()
: TStorage
- tt
: PlasmidCanvas
- TTestSuite
: TAminoAcids
- TTreeItem()
: TTreeItem
- TUndo()
: TUndo
- TUReadSeq()
: TUReadSeq
- TURLtext()
: TURLtext
- turn()
: TVector
- turned
: TVector
- TVector()
: TVector
- TVectorEditor
: TVectorEditor, TVectorItem
- TVectorItem()
: TVectorItem
- TVectorTree()
: TVectorTree
- TVirtualGel()
: TVirtualGel
- TXMLfile()
: TXMLfile
- Type()
: TiXmlNode
- type
: TVirtualGel, TGelLane, TTreeItem, TVector, TVectorItem, TiXmlNode, TIMGitem, TGraphScale, TextImportDialog, TClone_Gene, SeqPlot, panel_data, cmd_line_data, TDDR
- TYPECOUNT
: TiXmlNode
- u
: TMySQLDialog
- UCfirst()
: TStorage
- ulimit
: SeriesMat
- undo
: TVector
- Undo()
: MyChild, TAminoAcids
- unifiedFE
: TSantaLucia
- unit
: TGraphScale
- unit_volume
: TGelLane
- UNKNOWN
: TiXmlNode
- Unknown()
: TiXmlHandle
- unknownAA
: SeqAA
- unmark()
: TMarkMem, SequenceCanvas
- up
: EIpanel
- Update()
: EILB
- update2version()
: MyFrame
- updateCCP()
: MyFrame
- updateColor()
: TEnzymeSettingsTab
- updateColorButton()
: TEnzymeSettingsTab
- UpdateDisplay()
: TGraphDisplay
- updateDisplay()
: TVector, TPhyloTree
- updateEdit()
: SequenceCanvas
- updateGlobalEnzymes()
: TEnzymeSettingsTab
- updateItem()
: TVectorEditor
- updateLinkedItems()
: PlasmidCanvas
- updateList()
: TPrimerDialog
- updatePrimersFromSequence()
: TPrimerDesign
- updatePrimerStats()
: TPrimerDesign
- updateProtease()
: TStorage
- updateProteases()
: SeqAA
- updateRestrictionEnzyme()
: TStorage
- updateResultSequence()
: TPrimerDesign
- updateSequence()
: TAlignment
- updateSequenceCanvas()
: MyChild, ChildBase
- updateToolbar()
: MyChild, ChildBase, TAminoAcids
- updateTreeList()
: TPhyloTree
- updateTwoLists()
: TManageDatabaseDialog
- updateUndoMenu()
: MyChild, ChildBase, TAminoAcids
- updating
: TPrimerDesign
- upper
: TPrimer
- url
: blastThread
- usage()
: TIPC
- use
: TProtease
- use_background
: AlignmentAppearanceDialog
- use_color_coding
: TEnzymeRules, TEnzymeSettingsTab
- use_foreground
: AlignmentAppearanceDialog
- use_max_cutoff
: TEnzymeRules
- use_min_cutoff
: TEnzymeRules
- use_nonstandard_translation_table
: ProgramOptionsDialog
- use_proteases
: TProteolysis
- useAdditionalDatabase
: AutoAnnotate, TAutoAnnotateDialog
- useChouFasman()
: SeqPlot
- useCommonDatabase
: AutoAnnotate, TAutoAnnotateDialog
- useCoolCanvas
: MyFrame
- used_types
: CGview
- useDefaultColors
: CGview, CGdialog
- useDirectRoutines()
: SeqPlot, SeqFeature, SeqABI, SeqAA, SeqRestriction, SeqPrimer, SeqDNA, SeqBasic
- useGel()
: MyFrame
- useHP()
: SeqPlot
- useInternalHelp
: ProgramOptionsDialog, MyFrame
- useit
: TEnzymeRules
- useMachete
: AutoAnnotate, TAutoAnnotateDialog
- useMaxCutoff
: TEnzymeSettingsTab
- useMetafile
: ProgramOptionsDialog, MyFrame
- useMinCutoff
: TEnzymeSettingsTab
- useMW()
: SeqPlot
- useNcoils()
: SeqPlot
- useOffset
: TItemEditDialog
- useOnlineHelp
: ProgramOptionsDialog, MyFrame
- usePI()
: SeqPlot
- userData
: TiXmlBase
- useSettings
: TEnzymeSettingsTab
- useTwoToolbars
: ProgramOptionsDialog, MyFrame
- utf8ByteTable
: TiXmlBase
- v
: TVectorEditor, TSilmutDialog, TRestrictionEditor, TProteolysis, tseqres, TManageDatabaseDialog, CGview, TAlignLine
- v0
: TPrimerDesign, TManageDatabaseDialog, EIpanel, TAminoAcids
- v1
: EIpanel, TAminoAcids
- v2
: TManageDatabaseDialog
- val
: EIpanel, color
- valFC()
: EIpanel
- validseq
: TGenBank
- Value()
: TiXmlAttribute, TiXmlNode
- value
: TiXmlAttribute, TiXmlNode, TGenBankFeature, TFLAG
- van
: TAlignmentDialog
- varFont
: SequenceCanvas
- vary_base()
: TVector
- vav
: TAlignmentDialog
- vc
: TPrimerDesign
- vcn
: TAlignmentDialog
- vcols
: panel_data
- vcv
: TAlignmentDialog
- vec
: SeqAA, SeqRestriction, SeqDNA, ChildBase
- vecEdit()
: TVectorTree, SequenceCanvas, PlasmidCanvas
- vector
: TDDR
- vectorLength
: ProgramOptionsDialog
- vectors
: TMainTree, TCloningAssistant
- vectorTitle
: ProgramOptionsDialog
- verbindung
: TIPC
- Version()
: TiXmlDeclaration
- version
: TiXmlDeclaration
- vf
: ABItype
- vg
: TMyGelControl
- vi
: TGelLane, TItemEditDialog, SequencePartList, TGenBank, FindSequenceDialog
- vi_l
: TGenBank
- view_from
: SeqABI, TABIviewer
- view_to
: SeqABI, TABIviewer
- viewMode
: MyChild
- vl
: SequencePartList
- vl2
: SequencePartList
- vlines
: panel_data
- vlist
: TCloningAssistant
- vpx
: SequenceCanvas
- vpy
: SequenceCanvas
- vr
: SeqFeature
- vroot
: TVectorTree
- vs
: TGelLane, TSilmutDialog, TPDB, TGenBank, TAminoAcids
- vs_l
: TGenBank
- vscrollbar
: panel_data
- vseqs
: panel_data
- vt
: TLigationDialog
- vv
: TLigationDialog
- vw
: TGelLane
- vx
: SequencePartList
- vy
: SequencePartList
- w
: TIMGreader, TPrimerDesign, PlasmidCanvas, fit_dat
- wait
: blastThread
- wantOverwrite
: SequenceCanvas
- was
: EILB
- weight
: TFragment, TPTree
- wellform()
: CGview
- whatsthis()
: SeqPlot, SeqFeature, SeqABI, SeqAAstructure, SeqAA, SeqRestriction, SeqAlign, SeqPrimer, SeqDNA, SeqBlank, SeqDivider, SeqNum, SeqBasic
- width
: CGview, CGdialog
- win
: fit_dat
- window
: TVector
- within()
: AutoAnnotate
- worf
: TVector
- wrapit()
: TGenBank
- WriteIntoBitmap()
: TPhyloTreeBox, TMyImagePanel
- writeProtect
: TStorage
Generated on Fri Aug 11 16:19:43 2006 for GENtle by
1.4.1