#include <stdio.h>
#include <string.h>
#include <ctype.h>
#include <stdlib.h>
#include "clustalw.h"
Functions | |
sint | malign (sint istart, char *phylip_name) |
sint | seqalign (sint istart, char *phylip_name) |
sint | palign1 (void) |
float | countid (sint s1, sint s2) |
sint | palign2 (char *p1_tree_name, char *p2_tree_name) |
Variables | |
double ** | tmat |
Boolean | no_weights |
sint | debug |
sint | max_aa |
sint | nseqs |
sint | profile1_nseqs |
sint | nsets |
sint ** | sets |
sint | divergence_cutoff |
sint * | seq_weight |
sint | output_order |
sint * | output_index |
Boolean | distance_tree |
char | seqname [] |
sint * | seqlen_array |
char ** | seq_array |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|